Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1630 ATGGTACCAGAGAACCTGAAGAAACAACTCGCCTTGGCCGTGAGAAGCATCCAATGGAGCTACGCAATCTATTGGTCTGGTTCACCTGACAACCCCGGGGTTTTCGAGTGGGGTGAAGGGTATTACAATGGGGACATAAAGACGAGGAAAACAAGCCAAGGAGGAGAATTTAATTCAGACCAAATAGGTTTACGAAGGAGCGAGCAACTCAGAGATCTCTATGAGTCTCTTGCAACTGCAGAATCAAGTCCACAAGCTAAAAGGCCTTCAGCTTCACTATCACCTGAGGATCTCACTGATACAGAATGGTATTATTTGGTGTGCATGTCATTTGTATTCAACATTGGCCAAGGGTTGCCTGGAAGAACTCTGGTGAAAGGTCAACCTATTTGGCTGTACAATGCCCATTTGGCTGATAGTAGAATTTTTAGTCGTTCTCTTCTGGCAAAGACAGTGGTATGCTTCCCTTTTCTGGACGGTGTTCTTGAGCTTGGCACAACCGATCCAGTTTCAGAGGACCTCAGTCTCATTCAACGCATGAGAGCTTCTTACTTGGACGTTTTAGATGCCAAAGTTCGCAAGAACTCTGTAGTTGCATTTAGTACAGGAGACGGCGAAGAAATTGCTGGTGCAGTATTTGATCATAATGCTTTTGATGTAAAATTGACTCCTGAATCAGAATATGACTTGGCCAATGCAATTTCTCCCAATAATAGTTCAAATGAGTTCCAAGCCAATAATCAAGCAGATGAGAGATTCATGGTTGAAAGAATAAATGGTGTTGCTTCCCATGTCCAAAGCTGGCAAGTAATGGAGGATGAGTTGAGTAATTGTGCCCACACTTCCATGAATACTAGTGACTGTATATCTCAAAGTATTGCTGGTTCTGAAAAGAATGCTTCAGTTCCCAAGGTGGACCATTGTGGGCAAGATCTTCAAGAGGGTCAAAACACAAGAATGACCATGGTAGATGCTCACAGTGATGATTGGCATTATCAAAATGTTCTTTCTTCTCTTCTTAAAAGCTCAGACCAATTAATTATGGGAGCACATTTTCAAAACTTCCATTGTGAATCCGGTTTTGTCAGTTGGAAGAGAGAAGGATCAATGGGTTGTCAATGGCCAAGAGGGGGAACTCGCCAAAAAATATTGAAGAAGATATTGTTTGAAGTTCCACGTATGCACACGGATATGTTGCTCGAGGCTCGAGAAGAAAATGACTATAAAGAGGGAATGAGACCTGAAGCTGATGAAATTGGCTTGAACCATGTACTGTCTGAAAGAAAGAGAAGGGCAAAACTAAATGAAAGGTTTTTAACCCTTAAATCAATGGTTCCTTTGATTACTAGGGATGACAAAGTTTCGATACTAGATGAGGCAATTGAATACCTTAAAAAGCTGGAGAAAAAGGTGAGAGAGTTGGAAGCCCGCCGGGAGTCCAAAGATTCCGAGGCTAGAACTAAAAGAGCACCTCAAGATGTTGCGGAAAGGACTTGTGATAATTATTGTAACAAGAGATCTGATAAAGGCAAGAAGCCAGCGACGAGCAAGAGGAAGGCTTGTGACATTGATGAGACAGAGACAGAGATTGATTCAGTTCGTCTAAAAGATATTTCTAACAATGTTACTATCTGCATGAACGACAACAAGGTTTTGATTGAATTGAAGTGTCCTTGGAGAGAAGGAGTTCTACTAGAAATAATGGAAGCAGTCAGCAATCTTCATTTAGATTTTCATTCAGTTCATTCATCAGAAGCTGATGGGACTCTGTATTTAACCATGAAATCTAAGATCAGAGGAGCAGCTTTTAACTCAACAAAAAATATCAAACAAGCACTCCTCAAGGCAGCTTGGAAGTGTTGA 1863 0.4144 MVPENLKKQLALAVRSIQWSYAIYWSGSPDNPGVFEWGEGYYNGDIKTRKTSQGGEFNSDQIGLRRSEQLRDLYESLATAESSPQAKRPSASLSPEDLTDTEWYYLVCMSFVFNIGQGLPGRTLVKGQPIWLYNAHLADSRIFSRSLLAKTVVCFPFLDGVLELGTTDPVSEDLSLIQRMRASYLDVLDAKVRKNSVVAFSTGDGEEIAGAVFDHNAFDVKLTPESEYDLANAISPNNSSNEFQANNQADERFMVERINGVASHVQSWQVMEDELSNCAHTSMNTSDCISQSIAGSEKNASVPKVDHCGQDLQEGQNTRMTMVDAHSDDWHYQNVLSSLLKSSDQLIMGAHFQNFHCESGFVSWKREGSMGCQWPRGGTRQKILKKILFEVPRMHTDMLLEAREENDYKEGMRPEADEIGLNHVLSERKRRAKLNERFLTLKSMVPLITRDDKVSILDEAIEYLKKLEKKVRELEARRESKDSEARTKRAPQDVAERTCDNYCNKRSDKGKKPATSKRKACDIDETETEIDSVRLKDISNNVTICMNDNKVLIELKCPWREGVLLEIMEAVSNLHLDFHSVHSSEADGTLYLTMKSKIRGAAFNSTKNIKQALLKAAWKC 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1630 620 SMART finulus 424 473 IPR011598 GO:0046983
Acco11g1630 620 PANTHER TRANSCRIPTION FACTOR TT8 2 615 - -
Acco11g1630 620 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 182 IPR025610 -
Acco11g1630 620 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 418 467 IPR011598 GO:0046983
Acco11g1630 620 MobiDBLite consensus disorder prediction 475 494 - -
Acco11g1630 620 Pfam Helix-loop-helix DNA-binding domain 422 468 IPR011598 GO:0046983
Acco11g1630 620 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 421 480 IPR036638 GO:0046983
Acco11g1630 620 Gene3D - 421 492 IPR036638 GO:0046983
Acco11g1630 620 Coils Coil 457 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1630 Acco-ChrAcco11 30773239 30776420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1630 2 620 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 45.331 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco11g1630 bHLH-MYC_N 4.8e-43 CL0161