Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1626 ATGGGTCCCACCAAGGTGAGCTGTCTTGCATATCCATCTGCCAAACCAGATAAGAGTCTTTAAACTTGCTTCATTGAGTTAGGTGGAAGAAAGAAGCTTATTCCACACAGAGAGCTGGAGAAAGCAACAATGGACACAAAGGAAGATGTGAGAGTCGGAGCAAACAAATTCTCAGAGAGGCAGCCACTGGGCACGGCGGCTCAGAACGACAAGGACTACAAAGAGCCACCACCGGCACCGTTGTTCGAGCCAGGTGAGCTCAAGTCATGGTCATTCTACAGAGCCGGCATCGCAGAGTTCATCGCCACCTTCTTGTTCCTTTACATCACCATCTTAACCGTCATGGGCGTCAAGAATTCACCCAATAAGTGTGCCTCTGTTGGCATCCAAGGCATTGCTTGGGCCTTTGGTGGTATGATCTTTGCTCTTGTCTACTGTACCGCCGGAATCTCAGGTGGACACATAAACCCAGCAGTGACTTTTGGTCTGTTCTTGGCGAGGAAGCTGTCTCTCACAAGGGCACTGTTTTACATGATCATGCAGTGTCTTGGAGCTATATGTGGTGCTGGTGTTGTGAAGGGTTTTGAGGGTAAGGCTAGGTATCAGATGAACCTTGGTGGAGCAAATTCGGTAAGCCATGGATACACCAAGGGTGATGCTCTTGGAGCTGAGATTGTTGGCACCTTTGTCCTTGTCTACACTGTGTTTTCTGCTACTGATGCTAAGAGAAACGCCAGAGACTCTCATGTCCCTCTTTTGGCTCCTCTTCCCATCGGATTTGCTGTGTTCTTGGTACACTTGGCGACTATTCCCATCACAGGAACAAGTATAAACCCAGCTAGAAGTTTGGGTGCTGCCGTCATCTTCAACAGAGACGCTGCATGGGATGATCATTGGATTTTCTGGGTTGGACCTTTCATTGGAGCTGCACTTGCTGCGGCATATCACCAGATAATCATCCGAGCCATTCCTTTTAAGACTAGGGCTTGA 990 0.4869 MGPTKVSCLAYPSAKPDKSLXTCFIELGGRKKLIPHRELEKATMDTKEDVRVGANKFSERQPLGTAAQNDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYITILTVMGVKNSPNKCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMIMQCLGAICGAGVVKGFEGKARYQMNLGGANSVSHGYTKGDALGAEIVGTFVLVYTVFSATDAKRNARDSHVPLLAPLPIGFAVFLVHLATIPITGTSINPARSLGAAVIFNRDAAWDDHWIFWVGPFIGAALAAAYHQIIIRAIPFKTRA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1626 329 NCBIfam MIP family channel protein 98 315 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1626 329 Gene3D Glycerol uptake facilitator protein. 79 327 IPR023271 -
Acco11g1626 329 CDD MIP 94 319 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1626 329 ProSitePatterns MIP family signature. 154 162 IPR022357 -
Acco11g1626 329 PRINTS Major intrinsic protein family signature 94 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1626 329 PRINTS Major intrinsic protein family signature 259 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1626 329 PRINTS Major intrinsic protein family signature 136 160 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1626 329 PRINTS Major intrinsic protein family signature 299 319 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1626 329 PRINTS Major intrinsic protein family signature 173 192 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1626 329 PRINTS Major intrinsic protein family signature 223 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1626 329 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 54 324 IPR034294 -
Acco11g1626 329 FunFam Probable aquaporin PIP1-2 79 329 - -
Acco11g1626 329 Pfam Major intrinsic protein 86 316 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1626 329 SUPERFAMILY Aquaporin-like 86 321 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1626 Acco-ChrAcco11 30749148 30752486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1626 47 329 Major Intrinsic Protein MIP AT3G61430 85.866 5.05e-175 484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1626 11 30749148 30752486 Acco11g1626 11 30749148 30752486 ECH