Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1613 ATGGCACGATGGTCAGGTTTCACAAACGGATCTTCGGAAGATTGCCTTGAAACTGTTGGAGGACATCAGGGTAATGACTGTTGCCTCAACGTTGCTCACGTTGTTAGAGATCAACTTGATGATGAAGTTAAAGTAGAGTGCTTGTTTCATCAACTTCTATCAAATTATATCAAGGAGAAGAATTCTAGGGGCATTGTTCGTCCTCTTCCTGTAATGCTTGGTGATGGTCAATCGTTGGATTTATACAAACTGTTCTTCTCTGTGAAGGAAAGAGGTGGGTATGCTTTGGTGTCGGAGAAAGGATTGTGGGGTCTTGTGACTAAGGAATTCGGTTTGAACCCTAAACTTTTGGCTTCGGTGAAATTGGTATATGACAAGTACTTGAATGAGTTTGAAAGATGGCTTAGCAAAGCTCGTGGAGGAAAGAATTTCAAAAGTGGGAATCATGAGTGTAATATAGATTTGAAGTCAGTGCTGCCAGAGCTAGCAGAAGAGTTTAGAGATTTATTATCCCGTGACGGCGAGTTGAAAGATGATGTATCTGTTCAGCTGCTGTCATGTAAAATGAGAAGCAACATTGACTTGATTAATCATGAGTATGAGATGAATTTATTGGACAAAAAAAATCAGCCTCCTATATGCGAGAATGTCCACAGTATCCTTGGTGATGTTGACTTGAAATTTTGTAACAGTGTTGAGGATGATCTTGTTAGCACGAACTCAGAAGTTTCTTTGAAGGAATTTAGTTCTCGCAAGCGCAAACGAGAAGCATTATCTTCAATGCTGAACTGGATCAGAAAAATTGCAAAGCATCCTCGTGATCCTTCAATTGAACAGGTACCAGAAGCTTCTAAGTGGAAGGAGTATAAAGGACAAGATTTTTGGGTTCAGATACTTAGAGCAAGAGAGGCACTGCAGCTGAAATCTTGCGACAAACCAACCTGTGGGCAGTCTCCTTTACAGAAGCAAAAGATCCATCCCGCCATGTATGAGGATCATGCTGCTGTCAGTTACCATTCTACGGCAAAACTGAGATGGAGCAAAAGGCTGCCTACCTCAATTAAATCTCAGATATGCTCTTGTTGCGATACACGATTAACTACTGAAAACAAGTTACCCTGTTCAGTCGCCACTGAGGCAGAAAGTGCTTCTCTAGAGAAAAAAGCTGCAGCAGATGGTTCGTTGAATGCAAAGGAAACAGCCAACCCGTCCACAGATGATACTGTCAAAAAAATAGTAGCTATAGGTCCTCTTTTTCAAGCTGAAGTGCCGAAATGGACTGGTGTAGTTTCTGAAAGGGATTCTAAATGGTTGGGGACACAAGTATGGCCTTCGAAGGATAGGGAACTGCAACCTTTTACTGAGACTGGTATTATTGGGAGAGGAAGACAAGAGGCTTGTGGCTGTCAAGTTCAAGGTTCTGTTGAATGTGTTAGATTTCATATTGCTGAGAAGAGGATGAAGTTGAAGCTTGACTTGGGCTTAGCATTTTACCATTGGGGATTTGATCGTATGGGGGAGGAAGTTTCACTTCAATGGACTCCTGAACAAGAAAAGAAATTCAAAGATATTATGATGTCAAATCTGCCCTCCCAAAATATGAGCAAGCCGTTCAAGTATTTTCCAAAGAAAATGAGGAAAAGCTTGATTAGTTATTACTTCAATGTATTTCTTATTCAACGAAGGATTTATCAGAATCGTGTGACTCCAAATAATGTTGATAGTGATGATGACGAACATGAATTTGGATCTTTTACCGATGGCTTCGGGATGGAAGCTTTAACGGGTCCAGGTCACAAGTTTCTGGAGTGTTCACTGAACAATCGATGCACTGAATTGGAGTGA 1845 0.4103 MARWSGFTNGSSEDCLETVGGHQGNDCCLNVAHVVRDQLDDEVKVECLFHQLLSNYIKEKNSRGIVRPLPVMLGDGQSLDLYKLFFSVKERGGYALVSEKGLWGLVTKEFGLNPKLLASVKLVYDKYLNEFERWLSKARGGKNFKSGNHECNIDLKSVLPELAEEFRDLLSRDGELKDDVSVQLLSCKMRSNIDLINHEYEMNLLDKKNQPPICENVHSILGDVDLKFCNSVEDDLVSTNSEVSLKEFSSRKRKREALSSMLNWIRKIAKHPRDPSIEQVPEASKWKEYKGQDFWVQILRAREALQLKSCDKPTCGQSPLQKQKIHPAMYEDHAAVSYHSTAKLRWSKRLPTSIKSQICSCCDTRLTTENKLPCSVATEAESASLEKKAAADGSLNAKETANPSTDDTVKKIVAIGPLFQAEVPKWTGVVSERDSKWLGTQVWPSKDRELQPFTETGIIGRGRQEACGCQVQGSVECVRFHIAEKRMKLKLDLGLAFYHWGFDRMGEEVSLQWTPEQEKKFKDIMMSNLPSQNMSKPFKYFPKKMRKSLISYYFNVFLIQRRIYQNRVTPNNVDSDDDEHEFGSFTDGFGMEALTGPGHKFLECSLNNRCTELE 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1613 614 ProSiteProfiles ARID domain profile. 43 136 IPR001606 GO:0003677
Acco11g1613 614 SUPERFAMILY ARID-like 38 140 IPR036431 GO:0003677
Acco11g1613 614 SMART bright_3 44 137 IPR001606 GO:0003677
Acco11g1613 614 Gene3D - 33 150 IPR036431 GO:0003677
Acco11g1613 614 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 41 592 - -
Acco11g1613 614 SMART ARID_2 40 132 - -
Acco11g1613 614 CDD ARID 49 132 - -
Acco11g1613 614 Pfam ARID/BRIGHT DNA binding domain 49 132 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1613 Acco-ChrAcco11 30626242 30630239 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Acco11g1613 ARID 7e-12 CL0123