Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1612 ATGGTTGCTGTTTTAAGGGAGATGGGCGGTTGCTGTTGCTGTTACAGTCCTTCCAAAGAAACTGAACCGCGCGATCCACCACCACCGCCCGTCAATAACCGAGGAGCATCAGACGAGGATGCTCTACTATCATCTGCTCATGGTTCTGCCTCTGCTTCCTCTCAAGGGCCCCTTGTTAATGCTAATCTTGAAACTTCAGCTCCTGACACTAGGACAACACCTCCCGATCCTGTTCCTTCCAGCAGTGATACCATGGCTGTCACTCAAACTGTACTCGGGGCTCATGAGATTAATGATAATAAAACTAATGCTTTCCTTCAATCTGCAAATCCTAATTCAGTTCAAGACATAGCTAGTACTAGCGGTGGTCATGGAGATCTAGAAGAAATGGAACAGGACTCAGAAAATGAACTTCAAAATGTAGAAGAAGCGGTCAATTTAGCTGAAGAGAAGGATGGATGCCTTATCTGTTTAGAAGGGTATGATGCCTTGGATCCAAAACTAAGCATACAATGTGGTCATCATTTTCACCTTGCATGCATTCTAAATTGGAGGGAAAGAAGGAATACCTGTCCTGTGTGTGAAACGGTTATGGTTTTTGATCCTCCAATTGATTAA 618 0.4417 MVAVLREMGGCCCCYSPSKETEPRDPPPPPVNNRGASDEDALLSSAHGSASASSQGPLVNANLETSAPDTRTTPPDPVPSSSDTMAVTQTVLGAHEINDNKTNAFLQSANPNSVQDIASTSGGHGDLEEMEQDSENELQNVEEAVNLAEEKDGCLICLEGYDALDPKLSIQCGHHFHLACILNWRERRNTCPVCETVMVFDPPID 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1612 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 199 IPR013083 -
Acco11g1612 205 MobiDBLite consensus disorder prediction 44 83 - -
Acco11g1612 205 SUPERFAMILY RING/U-box 153 201 - -
Acco11g1612 205 Coils Coil 124 151 - -
Acco11g1612 205 SMART ring_2 154 194 IPR001841 -
Acco11g1612 205 Pfam Ring finger domain 154 194 IPR001841 -
Acco11g1612 205 MobiDBLite consensus disorder prediction 16 83 - -
Acco11g1612 205 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 47 201 - -
Acco11g1612 205 ProSiteProfiles Zinc finger RING-type profile. 154 195 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1612 8 205 C3H Transcription Factor Family AT5G41350 39.815 9.94e-32 113