Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1609 ATGTCTTCAAATGCCTACGCTTTTGATTCTTTTCCCAGACATTCGATCTCATCGGACATGGCTCCCTCCGACACACCTGGCGGAGGCGACCTTTTCTTCTCCGACCCTTTTCCTTTCCATTTCTTCAACCCCACCGACGAGGCCTCCGTTCATCAGATTCCAAACGAAACTGCTGCTTCTTCTTCTCTTGACCCTTTTTCCTCTTCCTTCTTTTCCTTTTCTCCTCCAAGTAACCACCTGGAAAACCTCAGCCTTTATCACCAGCATCTAGAAACACAGTTTGGAAATTTCTCTGGTCTTGATGATGGGTTCAAAGCAGTGAAGAGTGAAGAATTACAAATGGGTGGTGATTACAGCAACGGAAATCAGAACTTTGTTCCTCAAAATAATGCTTCTGAAAATGTACACAAGTCCATTCAAAGGAGCTACAGTAGTAACTGTTTTGATGGGAAACCTGGTTTTCTATCGCAATCTCACTATGATACTCTCATAGACCCCTCAAATTTTCATGGCCAGGCCATGAATTCTCCTGAGAACAATCAAGTAAGAAGAGTGTGCAGTACAGGAGACTTGCAGAACATGGAATCATCAACTCAAGCGAACCAGAGGGAAGGGTTGTTCTTAGAGGAAGCAAACTTCAAAGTAGGCCGTTACAGTGCCGAAGAAAGGAAAGAGAAAATCTCCAAGTACAGAGCCAAGCGAAGCCAGAGGAACTTCAACAAGACCATCAAGTATGCATGCCGGAAAACACTGGCGGATAATCGGCCACGCATACGTGGCAGATTTGCCCGAAACGACGAGACGGGAGAGAATCCCAAGGGTTCATGTTCAACCAGAAATGAAGAAGAAGACGAGTTCTGGTTTGAAGGAAAGCATGAAGAACAAGAGCAGATGATGACGTGGAGGATGATGAGTGGAGGAGGAGAATACATGAACAATTATGGATCAGATCCCCTTCATCAACATCAGTTCCAATACCGTAGCTTTTGA 990 0.4485 MSSNAYAFDSFPRHSISSDMAPSDTPGGGDLFFSDPFPFHFFNPTDEASVHQIPNETAASSSLDPFSSSFFSFSPPSNHLENLSLYHQHLETQFGNFSGLDDGFKAVKSEELQMGGDYSNGNQNFVPQNNASENVHKSIQRSYSSNCFDGKPGFLSQSHYDTLIDPSNFHGQAMNSPENNQVRRVCSTGDLQNMESSTQANQREGLFLEEANFKVGRYSAEERKEKISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNDETGENPKGSCSTRNEEEDEFWFEGKHEEQEQMMTWRMMSGGGEYMNNYGSDPLHQHQFQYRSF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1609 329 Pfam CCT motif 223 265 IPR010402 GO:0005515
Acco11g1609 329 ProSiteProfiles CCT domain profile. 223 265 IPR010402 GO:0005515
Acco11g1609 329 MobiDBLite consensus disorder prediction 260 285 - -
Acco11g1609 329 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 55 290 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1609 Acco-ChrAcco11 30549955 30551365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1609 219 271 C2C2-CO-like Transcription Factor Family AT5G24930 49.057 1.04e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco11g1609 CCT 5.3e-18 CL0281