Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1607 ATGGGATTTCCGGTGGGTTACTCCGACCTCATCTTCCCCAAGATATTCCTTCACGTCCTTTCTCTTTTGGGTCTCATCCGAAAGATCGTCACCGTTCTCTTTCGCTATCTGGGTGTCCACGATTTTCTGGAGCCCGACATTGTTTGGGCCCACCCGGTACCCGAATTCCACTCGGTGTCGGCCATGCTCATCCGAGAAATCCTGCCGGTCGCTAAGTTCTCCGACCTGGTGGACCCGCCGGATAGCTGCGCCGTCTGTCTCTACGAGTTCGTGGCCGACGACGAGATCAGGCGGCTCACCAACTGTAGGCACATTTATCACCGGGGATGTCTGGACCGTTGGATGGGTTACGATCAGAGAACTTGTCCTCTGTGTCGAACACCTTTCATACCTCACGATATGCAAGCTGCCTTTAATGATAGGCTCTGGGCTGCTTCTGGCATTCATGAATTCTATGCTGATTCTGATGAATATCCTCATCTTTCTTCTTTTTAA 495 0.5172 MGFPVGYSDLIFPKIFLHVLSLLGLIRKIVTVLFRYLGVHDFLEPDIVWAHPVPEFHSVSAMLIREILPVAKFSDLVDPPDSCAVCLYEFVADDEIRRLTNCRHIYHRGCLDRWMGYDQRTCPLCRTPFIPHDMQAAFNDRLWAASGIHEFYADSDEYPHLSSF 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1607 164 ProSiteProfiles Zinc finger RING-type profile. 83 126 IPR001841 -
Acco11g1607 164 Pfam Ring finger domain 81 126 IPR001841 -
Acco11g1607 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 129 IPR013083 -
Acco11g1607 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 24 145 - -
Acco11g1607 164 SMART ring_2 83 125 IPR001841 -
Acco11g1607 164 SUPERFAMILY RING/U-box 63 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1607 Acco-ChrAcco11 30529868 30530362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1607 1 147 C3H Transcription Factor Family AT1G63840 59.091 1.55e-61 186