Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1596 ATGAAGCTACGCTGGCTTAGCCAGGATAGAGCAGGGGAGAAGAGAGCTTACTGTCTTGTTGCCGCCTCCTGCAGCCTTCGCCTACACTCACGCATTGCAACCATGATTATTCCTGAGAAGAACCGTCGTGAGATCTGCAAATACCTCTTCAAAGAGGGAGTTTGCTATGCAAAGAAGGACTTCAATATGCCTAAGCACCCCGAGATTGATGTCCCCAATCTACAAGTGATTAAGCTGATGCAGAGCTTTAAGTCCAAGGAGTACGTGCGTGAGACTTTTGCTTGGATGCACTACTACTGGTACCTCACTAACGATGGCATTGAGTTCCTTAGAACCTATCTCAATCTTCCTTCAGAAATTGTTCCCGCTACTTTGAAGAAACAAGCCAAGCCACCTGGTAGAACATTCGGTGGCCCACCTGGTGACCGTCCAAGGGGTCCGCCTCGCTTTGAAGGAGAACGTAGGTTTGGAGACCGTGACGGATACCGTGGAGGTCCCCGAGGACCTGGTGGTGACTTTGGAGACAAGGGTGGCGCTCCTGCTGACTACAGGCCTTCATTCGGGGGCTCTGGAGGAAGGCCTGGATTTGGTCGTGGTGCTGGTGGTTTTGGAGCACCAACAAGCTCCAATCTTTCATAA 639 0.5117 MKLRWLSQDRAGEKRAYCLVAASCSLRLHSRIATMIIPEKNRREICKYLFKEGVCYAKKDFNMPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPPGRTFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGSGGRPGFGRGAGGFGAPTSSNLS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1596 212 Pfam Plectin/S10 domain 37 128 IPR005326 -
Acco11g1596 212 MobiDBLite consensus disorder prediction 125 212 - -
Acco11g1596 212 MobiDBLite consensus disorder prediction 146 162 - -
Acco11g1596 212 Gene3D - 35 137 IPR036388 -
Acco11g1596 212 PANTHER 40S RIBOSOMAL PROTEIN S10 35 206 IPR037447 -
Acco11g1596 212 FunFam 40S ribosomal protein S10 35 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1596 Acco-ChrAcco11 30442371 30445401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1596 35 211 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 75.843 4.39e-76 225