Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1541 ATGGAACAATTCCGGCGAATAGGAGAGTTGGTTGGAAGTTTGAGGGCTCTAATGGTTTTGCGAGATGAGATTCAAATAAACCAGAGTCAATGTTGTTTGATCCTGAACATGTTCAACCTGGCATTTGAAACCATTGCGGAAGAGATCAAGCAGAACCTTGTTTTGGAAGAGAAAAACACTAAATGGAAACCCCTTGAATATCCCATGAGACAGATGTGCAGGGTGTTCAAAGAAGCTGAACTTTACATTAGACAATGCTTGGACTCTAAAGATTGGTGGGGAAAAGCCATTTCACTCCATCACAACAATGATTGTGTTGAGTTTCACATTCACAACTTGCTTTGTCATTTCCCTCCTGTTATTGAAGCCATTGAAGTTGCTGGAGAGGTTTCTGGACACAATCAGGGTGAGATGCAAAAGAAGAAATTTATGTTAATGAGGAAGTATGATGGGGAATGGAATGACCCTAAGCTTTTTCAATGGAGATTCGGGAAGCAGTATTTGGTGTCTGGTGAAATCATCAAACAGTTGGAGAATTCTTGGATGGAAGATCAATGGAGGCTCATAGAATTACTCAAGCAGAAGAAGAAGAAGAAGAATAACTCTACCTGCAGACTTGCTTCGACGAAAAACGAGCAAGGCCTTGCTGATATGCTCATCAAGAAGCTGCTAAATGGAACTGACAAATTGAACAAAAAAATTTTCCCCAGTTCAATCCTGTTGGGCTCCAAGGATTACCAAGTGAGGAGAAGATTGGGGAGCGGAAGAGAATTCAAGGAGATTCATTGGATGGGACATAGCTTTGCCTTGAGACATGTGAATGGGGAGATGCAAATATCAGAAACAGAGATTTATACTCTCTTATCACTCTCTCACCCCAACATAGTGCGATATCTTTGTGGATTTCATGATGAGGAAAAGAGAGAATTTTTCCTTGTGATGGAGTTGACGAATAAGGATCTTGAGAGCTATATGAAGGAAAGCTATGGTCCAAGGAAACAGATCTTGTTCTCTATACCAGTTGTGGTAGATATTATGCTTCAAATAGCAAGAGGCATGGAGTATCTCCACTCTAAAAAAGTATATCATGGAGCTCTTAATCCTTGTAATATCTTGCTCAAGTCATGGAATTCCCATGAAGGCTATTTTCAGGTAAAAGTTACAGGCTTCGGTTCATCCTTGAAGATCAATCCCCTTCATCAGGAAGAGATCAATCCTTCTATCTGGTATCATGCCCCTGAAGTTCTAACTGAGCTAGAATCTAAGACCAACGCTTCTAGTTCAAGCGTCAAGTGCTCTGAGAAAGCAGATGTCTACAGTTTCAGCATGGTTTGCTTTCAGTTGCTGACAGGAAAAATGCCTCCTTTTGAAGGAGATGGGTCAAACAGAAATATCAGAGAAGGGGAAAGGCCACTTTTCCCATACCCTTCACCAAAGTACCTTGTTAATTTGATTAAGAAGTGTTGGCATACTGATCCAAGCCTTCGTCCTAGTTTCTCCTCTATTTGTAGGATCTTACGTTCCATAAAGAAATTCCTTGCCATCAATACTGAGTTTCTTATCATCAATCCTGAACTTAACCAGCTTGAATTGACCTGCCCACCAGTGGATTATTGTGACATAGAAGCATTGTTTCTCAAGAATTTCCCAGCAGAGAAGGCATCTCATTTGCCTTGTGTATCACAGCTACCTTATGAAATGTTTGCTTACAAGATTTTTGAGAATGAGAAGACTGGTCCAAGCATTAGTGAAGATAATAGCTCAATCTCTAAGGAAGAAAATGACACTGATGTCCAAAAGAAAGCCTCGGGGGATGCAAATGCCTCCACATTGGAAGATCCAGGCCCGCTTTCAACAGATTCAAAGTCGTCATCTTCTGAGTCACAATCTACTTGTTCAGAGGTGCAGGCCAAGAGACATGTAAGAATAAAGCAGCAAACAGAAGATGATACCAAGAAAGATCAAGGAGCATTAAGGTTGCAAACTTCAAGATCATTAGCAACAAATCCACCTAACCACAATTCAAGGATGAACAGAGGGAGTGGATTAGCATCAAGCAAGGGAAGAAGAACTCCCCAAGTTCTTGACTCCAAGAACAACAACAAAAGCAGTCAATCAACACCATTGACAAAAACCTCAAGTTCAATTAGAAGAATCAGAAATGGGGAAGTGGCTAGTCCTAAGGGCATGCCAAAGACAAAAACTGGAAATGAGTCGCCTTTGACAAGACGTGGGCAACTCTTTGATTCTAAGAGTAGCTTGCAGATGAAGAAAGGGTTTGAGTCACCATTGACAAGAAGCAGCCATGTCTTGGATCCTAGTTCGAAGGTGAAAAAAGGGAATGAATCACCTTTTATGGCTAGAAAAATAAGACATTCCAATTTGAAGATGACAAGTGGGAACACGTCACCTTTTGTGACGAGTCCTTTCAGTTTCAACACTACATGCTCGAGAAGATGTGGTCAAGACTCAAATCTTGATCTCACTTGCAGGATGGACAGAGGAAGAATATCTCCATTTGCAACGAGCCCTTTAAGCTCATATGAAAGAGCCTATGGTAACATCTCCCAGCCTCAAAAAAGTTTGAAGATGAAAAGAGCCAGCTTGTCTCCATTGAAATTAAGCCCTTTGAGTTCATATACGCAACGAAATGGGCAAAACGGCACGCATGCAGCTGAGTGCCTGAATTCGATCCCCAATTCGTTTAACTTGCTTTGCTTCCCTGGTCTCTTTCTTCGTTCATCTCCGTCGTGGGTTTCCTCGTATCTTCCTCTCTCCATTTGTCTCTGCTTCGCTCCTACTCCTCCAGTCGCCGCCGCCTACTCCTCCGGCCACCGCAGCAGCCGCCGCCTGCTCCTCCAGCTTTTTGCCACCTTTATCCAGATTTGA 2889 0.4219 MEQFRRIGELVGSLRALMVLRDEIQINQSQCCLILNMFNLAFETIAEEIKQNLVLEEKNTKWKPLEYPMRQMCRVFKEAELYIRQCLDSKDWWGKAISLHHNNDCVEFHIHNLLCHFPPVIEAIEVAGEVSGHNQGEMQKKKFMLMRKYDGEWNDPKLFQWRFGKQYLVSGEIIKQLENSWMEDQWRLIELLKQKKKKKNNSTCRLASTKNEQGLADMLIKKLLNGTDKLNKKIFPSSILLGSKDYQVRRRLGSGREFKEIHWMGHSFALRHVNGEMQISETEIYTLLSLSHPNIVRYLCGFHDEEKREFFLVMELTNKDLESYMKESYGPRKQILFSIPVVVDIMLQIARGMEYLHSKKVYHGALNPCNILLKSWNSHEGYFQVKVTGFGSSLKINPLHQEEINPSIWYHAPEVLTELESKTNASSSSVKCSEKADVYSFSMVCFQLLTGKMPPFEGDGSNRNIREGERPLFPYPSPKYLVNLIKKCWHTDPSLRPSFSSICRILRSIKKFLAINTEFLIINPELNQLELTCPPVDYCDIEALFLKNFPAEKASHLPCVSQLPYEMFAYKIFENEKTGPSISEDNSSISKEENDTDVQKKASGDANASTLEDPGPLSTDSKSSSSESQSTCSEVQAKRHVRIKQQTEDDTKKDQGALRLQTSRSLATNPPNHNSRMNRGSGLASSKGRRTPQVLDSKNNNKSSQSTPLTKTSSSIRRIRNGEVASPKGMPKTKTGNESPLTRRGQLFDSKSSLQMKKGFESPLTRSSHVLDPSSKVKKGNESPFMARKIRHSNLKMTSGNTSPFVTSPFSFNTTCSRRCGQDSNLDLTCRMDRGRISPFATSPLSSYERAYGNISQPQKSLKMKRASLSPLKLSPLSSYTQRNGQNGTHAAECLNSIPNSFNLLCFPGLFLRSSPSWVSSYLPLSICLCFAPTPPVAAAYSSGHRSSRRLLLQLFATFIQI 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1541 962 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 244 509 - -
Acco11g1541 962 MobiDBLite consensus disorder prediction 658 720 - -
Acco11g1541 962 Pfam Protein of unknown function (DUF1221) 21 243 IPR010632 -
Acco11g1541 962 ProSiteProfiles Protein kinase domain profile. 246 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1541 962 Gene3D Transferase(Phosphotransferase) domain 1 227 520 - -
Acco11g1541 962 MobiDBLite consensus disorder prediction 637 657 - -
Acco11g1541 962 MobiDBLite consensus disorder prediction 601 636 - -
Acco11g1541 962 FunFam Kinase family protein 243 519 - -
Acco11g1541 962 Coils Coil 192 212 - -
Acco11g1541 962 SUPERFAMILY Protein kinase-like (PK-like) 237 520 IPR011009 -
Acco11g1541 962 MobiDBLite consensus disorder prediction 732 771 - -
Acco11g1541 962 Pfam Protein kinase domain 266 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1541 962 MobiDBLite consensus disorder prediction 579 801 - -
Acco11g1541 962 MobiDBLite consensus disorder prediction 772 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1541 Acco-ChrAcco11 29860086 29865754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1541 253 513 MAP Kinase Kinase Kinase AT1G14000 31.071 6.28e-23 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Acco11g1541 Pkinase 6e-32 CL0016