Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1531 ATGGATGATCATCCTCCTAAACAGTCAACCTCTGAAGAAGTGAGCAGTACGGAGTGGGAGTTCATAAAGATGAGTGAGCAAGAAGAAGATCTCATCCACAGGATGTACAAGCTTGTCGGAAACAGGTGGGATTTGATAGCGGGACGCATTCCTGGTCGTAGAGCAGAAGAGATAGAGAGGTTCTGGATCATGAAACACTCCCAAGCTTTCTCTCCTGTTTATAAGGACTCAACATCTCTAAAACCCTCCAAATAA 255 0.4471 MDDHPPKQSTSEEVSSTEWEFIKMSEQEEDLIHRMYKLVGNRWDLIAGRIPGRRAEEIERFWIMKHSQAFSPVYKDSTSLKPSK 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1531 84 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 23 68 - -
Acco11g1531 84 SUPERFAMILY Homeodomain-like 25 63 IPR009057 -
Acco11g1531 84 SMART sant 20 68 IPR001005 -
Acco11g1531 84 FunFam MYB-like transcription factor 23 65 - -
Acco11g1531 84 CDD SANT 23 62 IPR001005 -
Acco11g1531 84 Gene3D - 24 83 - -
Acco11g1531 84 Pfam Myb-like DNA-binding domain 24 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1531 Acco-ChrAcco11 29778652 29780490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1531 24 62 MYB Transcription Factor Family AT5G52600 64.103 2.98e-13 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco11g1531 Myb_DNA-binding 3.7e-07 CL0123