Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1505 ATGGCTCATTCCTCATGTTTCATCTTCGTCTTCTTCCTCCTCCTCTTCCTTATCGATCCCACAGCATCAAGCTCTAACATCTGCGACACATATTGTGACATGGACGAAACTCCGATTCAGTTCCCTTTCCAGTTAGTCGGAGACAACGAAGCAAATCAAATTAATGGAACTAGCAGTCGTTGTGGTTACCCTGGTTTCGAACTTTCCTGCAATCAAGGCCGAACCATGATCCATCTCCCACACTCTGGACACTTCCTGGTTGATAAAATCTCCTACGAAAATCAAAAGCTTTGGATCAGAGACCCCGAAAATTGCCTCCCAAAACGTTTCTTAAACAACAGCAGCTTCAACCTCAAAGATTCAATCTTTCTACTCAGCGATGATTATATGCTCATGGAGTTCACCTTTTTCAATTGCTCCTCCAACGTCAGCCGACGGTATCCACTACCACCCATCCCTTGCCTGAGCTCCGACGACAACCCCAACTTCTCGGTGGTCGCCGTGTTGTCGGATCCTCAGTTTGCCCAATGGGTCGCAAGGTGTGACCCGATTGCCTCTGCTTCACTTCCTTATTCTATCACCGATAGACTATACTGGATGAACCTGAACGATGATATAGGCCTGCAATGGAACACGCCAAGCTGTGGAGACTGTGTAGCGAAAAATGGACGGTGTGAGTTTTTGACGAATACAGGTCTCGAAGTTGCTTGTTATTTACCACACGGAACTGGTCTTTCAAAATTTGCCAAGCTTGGATTAAGCTGTGGTGTGGGAATTCCCGGATTGCTTTGCGTGATTTGGATTGTGCACTTGAGGACGAGGAAGCGAAGAGAGAGCGAAGAGCGAAGAAGGCGGAGGAGCGATGTTGAACTGAATAATAATGTTGCAAGTCGGAGCTCTGTAATGGTTCTGGGGCTTGACGGAGAAACCATAGAGAAGTATCCGATGACCCGGATTGGTGATAGTGGGCGATTACCCGACCCGAATAACAACGTGTGCTCCATATGTCTCGGTGAGTACCAACCCCAAGACACGTTAAGGACTATACCAAATTGTAATCATTATTTTCATGCGAATTGTATAGATTCATGGCTCCACATGAATGCTACTTGTCCCTTGTGTCGAAAACTACCTCACTCCTAA 1143 0.4654 MAHSSCFIFVFFLLLFLIDPTASSSNICDTYCDMDETPIQFPFQLVGDNEANQINGTSSRCGYPGFELSCNQGRTMIHLPHSGHFLVDKISYENQKLWIRDPENCLPKRFLNNSSFNLKDSIFLLSDDYMLMEFTFFNCSSNVSRRYPLPPIPCLSSDDNPNFSVVAVLSDPQFAQWVARCDPIASASLPYSITDRLYWMNLNDDIGLQWNTPSCGDCVAKNGRCEFLTNTGLEVACYLPHGTGLSKFAKLGLSCGVGIPGLLCVIWIVHLRTRKRRESEERRRRRSDVELNNNVASRSSVMVLGLDGETIEKYPMTRIGDSGRLPDPNNNVCSICLGEYQPQDTLRTIPNCNHYFHANCIDSWLHMNATCPLCRKLPHS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1505 380 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 6 378 IPR046948 -
Acco11g1505 380 ProSiteProfiles Zinc finger RING-type profile. 333 375 IPR001841 -
Acco11g1505 380 Pfam Wall-associated receptor kinase galacturonan-binding 28 101 IPR025287 GO:0030247
Acco11g1505 380 Pfam Ring finger domain 332 375 IPR001841 -
Acco11g1505 380 SUPERFAMILY RING/U-box 328 376 - -
Acco11g1505 380 SMART ring_2 333 374 IPR001841 -
Acco11g1505 380 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 293 379 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1505 Acco-ChrAcco11 29540460 29541602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1505 32 378 C3H Transcription Factor Family AT2G46495 32.123 1.86e-49 168