Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1475 ATGGCCATCCCTCAAGCTCAAGATCCACCCACATCTCTAAATCTTTATCCACAAGAACTTCAGTTAAAGCTATACCAGGCTTTCATTTTCTCAATTCCAATCCTGTTTTCCATCATTCTCTTCCTCTTGTTTTATTTGTTCTACCTCAAGCGCAGGGCTTCCTCTCTCTCTTCCCCTCCTCACTTTCTTCCCACCACTGCTCCTTCAACTGCCTATCATTCCACTGGATTTCAATTGACGCTTCGGTTCCTTGACACTCTTCCAAAAGTTCTGTTTGATGAAGAATTGAAAGCAAGAGATTCACTATGTTGTGTGTGTCTGGGAGAATTTGAGATAAAAGAAGAGGTATTACAGATCCCTCAATGCAAGCATGTATTCCACAGAGATTGCATTTACCATTGGCTCTATTCACACTCCACTTGTCCACTGTGTAGATGTTGTATCATCCCTCCAACCAAGTTTCTGAATCCACCAACCCTCCATCCTCCTCCTCCTCTTGCAGATGAAGCTGCTTCTTCTAGTTCTGTTTCTGCTTCTTCCATATAA 546 0.4267 MAIPQAQDPPTSLNLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPPHFLPTTAPSTAYHSTGFQLTLRFLDTLPKVLFDEELKARDSLCCVCLGEFEIKEEVLQIPQCKHVFHRDCIYHWLYSHSTCPLCRCCIIPPTKFLNPPTLHPPPPLADEAASSSSVSASSI 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1475 181 Pfam Ring finger domain 103 145 IPR001841 -
Acco11g1475 181 SUPERFAMILY RING/U-box 81 158 - -
Acco11g1475 181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 150 IPR013083 -
Acco11g1475 181 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 25 155 - -
Acco11g1475 181 CDD RING-H2_EL5-like 103 145 - -
Acco11g1475 181 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Acco11g1475 181 SMART ring_2 103 144 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1475 Acco-ChrAcco11 29291523 29292943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1475 3 150 C3H Transcription Factor Family AT4G10150 40.132 4.86e-33 116