Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1462 ATGGCAGACTTTCCATTCATTTTCCACAGACAAAGTTTTCAACTTTATCTACTATGCTCACTAACAATCATCGTGGCTACTGCAGAATCTTCACCCGCTTGTTCTTTGGACCCAAACCTCGTGAAACCCTCAACCCCACTTGTCTCCTTCCTCGAACGTGTACAGGAAACTGCTTTAGCCACTTTGGGAAACTCTACCTTCGATCCTAAAACATATGTGGACTTGCCCTTGAAGTTTAACTTGTCTGAGACAGAGCAGGCATTTAATAAGCTTGCTAGGTCTGCTAATGGCTCTGTACCAGCAAATGTTTTGAATGGTTTTATAGAGAGATACTTTGATGGTGCAGGGGACGATGTGGTGTACCACGAACCAGAGGATTTCGTGGAAGAGCCAGAGGGATTCTTGCCCAAAGTTGAGCATCCAGAGGTGAGGGCATGGGCTTTGAAGGTCCATTCCCTTTGGAAAAACTTGAGTCGCAGAGTATCAAGTGGGGTTAAAAGCCATCCCAATTTGCATACTCTTCTTCCTCTTCCTGCTTCTTTTGTTATTCCTGGCTCACGCTTTCATGAGGTTTATTACTGGGATTCCTACTGGGTTATCAGGGGCTTACTGGTGAGTAAAATGTACAAGACAGCCACGGCAATTGTGACTAATCTTATTTCTTTAATAGAGGAATATGGGTTTGTGCTTAATGGTGCAAGAGCCTACTACACCAACAGAAGCCAACCTCCCCTTTTAAGTTCTATGATTTATGAGATTTACAATAGCACTGGTGATATAGAATTGGTCAAAAGATCTCTTCCTGCGCTACGTAAAGAATATGAATTTTGGAATTCAGACATACATAGGGTGACCATTGTGGATGGTCAAGGTTGCACTCACAACTTAAATCGTTATTATGCAATGTGGAATAAGCCTAGGCCAGAGTCTTCAATATACGACAAGGCATTTGCTTCCAAGCTTTTGAATGTTTCAGAAAAACAGCACTTTTACCGTGAAGTGGCTTCAGCTGCCGAATCAGGATGGGATTTTAGTACAAGATGGATGAGAGATCCATCAGATTTTACCACATTGGCTACAACAGCAGTAATACCTGTTGATCTAAATGCTTATATACTTGGGATGGAACTTAATATTGCGTTTTTCGCTGAAGTTACCGGAGATAATAGCACTGCTCAGCACTTCCTGCAACTAGCTGATCATAGGAAGAAGGCCTTCAACTCAGTTTTTTGGAACATAAACATGAAACAATGGCTTGATTACTGGTTCACAAGTAATACATGTCAGGGAGCTCAAGTCTGGGATGCTCACCAGCAGAATCAAAATGTGTTTGCTTCCAATTTTGTTCCTCTGTGGATGGAACCATTTTACTCAGACTCTTCGGTTGTGGGTAACGTTATTGGAAGCCTCAAAGCTAGTGGGCTGCTTCGTGTTGCTGGAATTGCTACCTCTCTGAAGAATTCAGGACAACAATGGGACTTTCCAAATGGATGGGCCCCACTTCAACATATGATAGTAGAAGGTCTAGTGAAGTCTGGGTTGAAAGAAGCGGCTTCATTAGCTGAAGAAATTGCAAGGAGATGGATCACAACCAACTATATTGCCTTTAAGAAATCAGGGTTTATGCATGAAAAATATAATGTGGAGAATTGTGGAGATTTTGGAGGTGGTGGTGAATATGTACCTCAGACTGGCTTTGGGTGGTCGAATGGAGTGGTGCTTGCTTTGTTGGAGGAGTTTGGATGGCCTCGAGATCAAAATATTGACTGCTAA 1773 0.4247 MADFPFIFHRQSFQLYLLCSLTIIVATAESSPACSLDPNLVKPSTPLVSFLERVQETALATLGNSTFDPKTYVDLPLKFNLSETEQAFNKLARSANGSVPANVLNGFIERYFDGAGDDVVYHEPEDFVEEPEGFLPKVEHPEVRAWALKVHSLWKNLSRRVSSGVKSHPNLHTLLPLPASFVIPGSRFHEVYYWDSYWVIRGLLVSKMYKTATAIVTNLISLIEEYGFVLNGARAYYTNRSQPPLLSSMIYEIYNSTGDIELVKRSLPALRKEYEFWNSDIHRVTIVDGQGCTHNLNRYYAMWNKPRPESSIYDKAFASKLLNVSEKQHFYREVASAAESGWDFSTRWMRDPSDFTTLATTAVIPVDLNAYILGMELNIAFFAEVTGDNSTAQHFLQLADHRKKAFNSVFWNINMKQWLDYWFTSNTCQGAQVWDAHQQNQNVFASNFVPLWMEPFYSDSSVVGNVIGSLKASGLLRVAGIATSLKNSGQQWDFPNGWAPLQHMIVEGLVKSGLKEAASLAEEIARRWITTNYIAFKKSGFMHEKYNVENCGDFGGGGEYVPQTGFGWSNGVVLALLEEFGWPRDQNIDC 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1462 590 Pfam Trehalase 67 581 IPR001661 GO:0004555|GO:0005991
Acco11g1462 590 Gene3D - 49 589 IPR012341 GO:0005975
Acco11g1462 590 PANTHER TREHALASE 42 588 IPR001661 GO:0004555|GO:0005991
Acco11g1462 590 PRINTS Glycosyl hydrolase family 37 signature 226 244 IPR001661 GO:0004555|GO:0005991
Acco11g1462 590 PRINTS Glycosyl hydrolase family 37 signature 564 577 IPR001661 GO:0004555|GO:0005991
Acco11g1462 590 PRINTS Glycosyl hydrolase family 37 signature 363 380 IPR001661 GO:0004555|GO:0005991
Acco11g1462 590 PRINTS Glycosyl hydrolase family 37 signature 484 500 IPR001661 GO:0004555|GO:0005991
Acco11g1462 590 PRINTS Glycosyl hydrolase family 37 signature 331 348 IPR001661 GO:0004555|GO:0005991
Acco11g1462 590 PRINTS Glycosyl hydrolase family 37 signature 406 422 IPR001661 GO:0004555|GO:0005991
Acco11g1462 590 PRINTS Glycosyl hydrolase family 37 signature 296 313 IPR001661 GO:0004555|GO:0005991
Acco11g1462 590 ProSitePatterns Trehalase signature 2. 491 500 IPR018232 GO:0004555|GO:0005991
Acco11g1462 590 SUPERFAMILY Six-hairpin glycosidases 61 583 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1462 Acco-ChrAcco11 29176430 29181039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1462 37 590 Trehalose Biosynthesis Gene Families AT4G24040 58.423 0.0 665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1462 11 29176430 29181039 Acco11g1462 11 29176430 29181039 ECH