Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1461 ATGTCAGCTTCAGGCATCGCAGAATCTTCATCTTCTTGCCCTTTGGACACAATCCTTGTGACACCCTCAATCCCTCTCGTTTCCTTTCTCGAACGCCTCCAAGAAACAGCAGTCAACACCTTTGGCAGATCCAACGTTGACCCAAAAACCTACGTTGACGTGTCGTTAAAGTTCAGCTTGTCTGAGACAGAGGAGGCATTCGATAAGCTTTCTAGGTCTGCAAATGGCTCTGTTCCAGCCAATGAGTTGAACGATTTTATAGAAAGATACTTTGATGGTGCAGAGGACGATATGGTGTACCACGAACCAGAGGATTATGTGGAAGAACCAGAGGGATTCTTGCCCAAAGTTGAACATCCAGAGATGAGGGCTTGGGCTTTGAAGGTCCATTCTCTTTGGAAAAACTTGAGTCGCAGAGTATCAAGTCGGGTCAAAACCCATCCCCATTTGCATACCTTTCTTCCTCTTCCTGCTTCTTTCGTCATTCCTGGCTCTCGCTTTCGTGAGGTTTATTACTGGGATTCCTACTGGATTATCAGGGGCTTACTGGTGAGTAAAATGTACCAAACAGCCAAAGCAATGGTGACTAATCTTATTTCTCTGTTAGAAGAATATGGATTTGTGCCTACTGGTGCAAGAGCCTACTACACCAACAGGAGCCAGCCTCCCCTTTTAAGTGCTATGATCTATGAGATCTACAATGCCACTGGTGATATAGAGCTGGTCAAAAGATCACTTCCTGCACTAAGGAAAGAGTATGAGTTTTGGAATTCAGAAATTCATAGGGTGACCGTTGTGGATTCCCAAGGTTGCACACACACCTTAAATCGTTACTATGCGATGTGGAATAAACCCAGGCCAGAGGGTTCGGTGAAGGACAAGAGATTTGCTTCCAAGTTTTTGGATGATTCAGAAAAACAGCACTTCTACCATGAAGTGGCTTCAACTTGTGAATCTGGATGGGATTTCAGCACAAGATGGTTGAGAGATCCGTTAGAATTTACATCAGTGGCTGCTACTCCTGTAATACCTGTTGATCTAAATGCATTTATTCTTGGGATGGAACTCAATATTGCATTTTTCGCTAAAGTTACTGGAGATAATAGCACTGCTCAGCACTTCCTGCAACTTTCTGATGGTAGAAAAAAGGCGCTCGACTCTGTTTTCTGGAACAAAAACATGAAACAATGGCTTGATTACTGGCTCACGAATAGTACTTGCCAGGGAGTTCAAGTCTGGGAAGATCAGCAGCAGAATCACAATGTGTTTGCTTCCAACTTTGTTCCTTTATGGATGGAACCATTTTACTCTGATTCTTCGATTATGGCTAGCGTTGTTGAAAGTCTCAAAACTTGTGGGCTGGTTCGTGCTGCTGGAGTTGCAACCTCTTTGACGAATTCTGGACAACAATGGGACTTCCCAAATGGCTGGCCCCCAATTCAACATATGATAGTAGAAGGTCTGATGAAATCTGGGTTGAAAGAAGCAGCTTCACTTGGGGAAGAAATTGCAAGGAGATGGATCACGACCAACTATATCGCCTACAAGAAAACAGGGTTCATGCATGAAAAATATAATGTGGAGCATTGTGGAGAGTTTGGAGGTGGTGGATTATATGTTCCCCAGACTGGTTTTGGGTGGTCTAATGGAGTGGTGCTTGCTTTCTTGGAGGAGTTTGGATGGCCTCGAGATCGCGATATTGACTGTTCGTCGATTTCTTCAGAACTTGACGAAATTGGCAATTGA 1746 0.4399 MSASGIAESSSSCPLDTILVTPSIPLVSFLERLQETAVNTFGRSNVDPKTYVDVSLKFSLSETEEAFDKLSRSANGSVPANELNDFIERYFDGAEDDMVYHEPEDYVEEPEGFLPKVEHPEMRAWALKVHSLWKNLSRRVSSRVKTHPHLHTFLPLPASFVIPGSRFREVYYWDSYWIIRGLLVSKMYQTAKAMVTNLISLLEEYGFVPTGARAYYTNRSQPPLLSAMIYEIYNATGDIELVKRSLPALRKEYEFWNSEIHRVTVVDSQGCTHTLNRYYAMWNKPRPEGSVKDKRFASKFLDDSEKQHFYHEVASTCESGWDFSTRWLRDPLEFTSVAATPVIPVDLNAFILGMELNIAFFAKVTGDNSTAQHFLQLSDGRKKALDSVFWNKNMKQWLDYWLTNSTCQGVQVWEDQQQNHNVFASNFVPLWMEPFYSDSSIMASVVESLKTCGLVRAAGVATSLTNSGQQWDFPNGWPPIQHMIVEGLMKSGLKEAASLGEEIARRWITTNYIAYKKTGFMHEKYNVEHCGEFGGGGLYVPQTGFGWSNGVVLAFLEEFGWPRDRDIDCSSISSELDEIGN 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1461 581 PANTHER TREHALASE 20 571 IPR001661 GO:0004555|GO:0005991
Acco11g1461 581 ProSitePatterns Trehalase signature 2. 470 479 IPR018232 GO:0004555|GO:0005991
Acco11g1461 581 Gene3D - 33 571 IPR012341 GO:0005975
Acco11g1461 581 PRINTS Glycosyl hydrolase family 37 signature 310 327 IPR001661 GO:0004555|GO:0005991
Acco11g1461 581 PRINTS Glycosyl hydrolase family 37 signature 342 359 IPR001661 GO:0004555|GO:0005991
Acco11g1461 581 PRINTS Glycosyl hydrolase family 37 signature 463 479 IPR001661 GO:0004555|GO:0005991
Acco11g1461 581 PRINTS Glycosyl hydrolase family 37 signature 205 223 IPR001661 GO:0004555|GO:0005991
Acco11g1461 581 PRINTS Glycosyl hydrolase family 37 signature 275 292 IPR001661 GO:0004555|GO:0005991
Acco11g1461 581 PRINTS Glycosyl hydrolase family 37 signature 543 556 IPR001661 GO:0004555|GO:0005991
Acco11g1461 581 PRINTS Glycosyl hydrolase family 37 signature 385 401 IPR001661 GO:0004555|GO:0005991
Acco11g1461 581 Pfam Trehalase 46 560 IPR001661 GO:0004555|GO:0005991
Acco11g1461 581 SUPERFAMILY Six-hairpin glycosidases 41 563 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1461 Acco-ChrAcco11 29169558 29173628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1461 11 569 Trehalose Biosynthesis Gene Families AT4G24040 55.773 0.0 644