Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1459 ATGGGTTTTTCGTCGTTTTGGAGTAGTCTGAAATGTCTTTGTTCTGCTCATGGTTGGTCTTATGCTATTTTCTGGCGATCAAACCCTCCTAATTCCTTGTTGCTGTCTGTGGAAGATGCTTACTATGAAGAGCAATTGGGACTAGAAATTACTAAGACGATTCCACAGCTTCATTTCCTGGCTGAAGGAATTGTTGGTCAAGTTGCTTTTACTGGCAAGCACAAATGGATTTTCTCAGATACTCAAACCCAGGAATGGAATTTAACAACAGGTGTCTTTGGAGGCCTAGATTGTTGTGAGCTTGATTCTGACTTGCGTCAACAATTCTCCTCTGGGATTAAGACAATTGCTGTGATTTCTGTTCAACCGTTGGGAGTAGTACAATTTGGATCCACACAAAAGATCTTGGAAAGAGAAGAAGTGTTGAAACAAACACAAAGATTGTTCATGGAGGCTGAAAATTTGGATATAGTTGATGCGCCAGCAAATATGGTTTTACCTTGGGACTTTGAAAATTATGATCTGAGTGGACTGTTGGCCTCTGAAAACTTGTGTTCTTGGAATCTCAACCCTGAAGATGACAATAACATCTTCAATGCGGGAATGAGAAATGTTTGTTTTTCAACAAGCATGGATGACTCTCTCCTTTCTCCCACACGTAAGGATCAGGGAGATGGAATCACCAGTTTGCATGACGAATCTTCTTGTCTTAGCGATCAACTCGCATCAGCCGCAGAAGCTCAAATGGTAATATCAGAGAAGGATAGTTTTGAAGTTCTTTTGAATCTTAACTCTTATGTGAAAAACCCATGTTTTGGCACACGGTGCAGTGAAGTTTCTTTGGGTTCATCATCAATGGCTCAAGATGTTAGTGCTGAGGATTCAGTATTGACCTCTCTGTACAGCATGAACAGAAGCATGCATGGATCATTTCAAGACAAATTAGGGAATTCTCTGGAATCCATGCACAACCCTTTTGTTCAATCACTACATGAACTGTCTCAGATGCCGACGGAGGACTTGTCTGAGATGTGCTCTGTGGATGATCTTTGTCAGAGGTTTAGTTCTTCTCCAGAACAAAGCACCTGTGCAACAGATACTCCATTGGAAAATTCTATCCTTCAATCTATGGATTTCAATCCCACTTGTGTGGCCTTGAGTAGTGATCCACTCAAAAATCTCTCAGATGGACACCAAACATCTACATTTATAAATGCTTTTGAAAGCAATACCTCACTTGATTTTGCTGGTGAGTTCTGGGGGAATATGATTGCACCAATGGTGAAATCTGCTACCGATATTACTGCTTCATCTGAATGGAAATCAGAGTTGAAGAATACTTTTACACCTAATGCCACCAAGAAGGGGTTATTTGCAGAGCTTGGTATTGACGAGCTTTTGAATGGTGGATCCAGTTTTGAGGATCAAATTTCTACTTCTACGAAAAAGCGTAGGACAGATTCATCTGGGAGGACTAATCCTGTTTCTAACTTGGACGCAAACCATCTTGTACACAAGAAAGAGATGTTTCCTAAATCAGTGGTTGGGTCTTGGATGGACCATGGTAATTGCTTCAATGGTGTCAAGGTTGTTCCCCAAAAGGCAGAGGAATCCACAAAGGTCTCAAGGAAGAGGGCTAGGCCGGGAGAGAGTACTCGGCCCCGACCAAAAGATCGCCAGCAAATCCAAGACCGTATCAAAGAATTGAGAGGGATCATCCCCAGTGGTGGAAAGTGTAGCATTGACTCTTTGTTGGATCGCACCATCAAATACATGGTTTTCTTGCAAAGCGTCACAAAATATGCAGACAAGCTGCAAGAACCCAAAAATCCAAAGCTCATAGAGGAGGCAAACAGTGTGGTTGAGAAGAACAAAAGTGTGGGAGAATCAGATATCAAAGGTGGTGGCGGTGTTACATGGGCATTTGAAGTTGCAGGTCAAAAAATGGCATGCCCCATTATAGTGGAGGACATTAACCATCCAGGCCAAATGCTCATAGAGATGCTTTGTGAGGATCAGGGCTTGTTCCTTGAGATAGCCGAAATAATCCGCGGATTTGGACTGAATATCCTGAAAGGGAAGATGGAAATCAGGGACAACAAGTTGTGGGGACAATTCATTGTTGAGGCAACAGACAGACATGTAACAAGGATTGATGTATTTTGGTACCTAGTTCAGCTTCTACCTCAGACAAGTGGTGCATCATCTGAAATGGATAATCATCATCAGAAAAAAGATATGGCACTACCTGCTGTGGCCATGACCTCTTCGGCTGTAAAAGTAGAAGTAGCCCTTTGTTCTTCCTTGGCTGCCTCTGTTAAGAGCAGGAAAACCCTTCATCAATGTGCAGGTCCCACAATGACCAAGGTGAGTAAAACCCAGTCGTTAAAATATAAAATGAAGCACTATAATCCCGCGGTGGTAGGGAAAGGAAGTTGGAAGAAAACCCCAGAATTTGGAATCGGAATCGGATCCGTTTCATCTTTGGAATTTGCTCTTTCCAATTCGCTCTTGTCCTTGATTCCGTAA 2529 0.4239 MGFSSFWSSLKCLCSAHGWSYAIFWRSNPPNSLLLSVEDAYYEEQLGLEITKTIPQLHFLAEGIVGQVAFTGKHKWIFSDTQTQEWNLTTGVFGGLDCCELDSDLRQQFSSGIKTIAVISVQPLGVVQFGSTQKILEREEVLKQTQRLFMEAENLDIVDAPANMVLPWDFENYDLSGLLASENLCSWNLNPEDDNNIFNAGMRNVCFSTSMDDSLLSPTRKDQGDGITSLHDESSCLSDQLASAAEAQMVISEKDSFEVLLNLNSYVKNPCFGTRCSEVSLGSSSMAQDVSAEDSVLTSLYSMNRSMHGSFQDKLGNSLESMHNPFVQSLHELSQMPTEDLSEMCSVDDLCQRFSSSPEQSTCATDTPLENSILQSMDFNPTCVALSSDPLKNLSDGHQTSTFINAFESNTSLDFAGEFWGNMIAPMVKSATDITASSEWKSELKNTFTPNATKKGLFAELGIDELLNGGSSFEDQISTSTKKRRTDSSGRTNPVSNLDANHLVHKKEMFPKSVVGSWMDHGNCFNGVKVVPQKAEESTKVSRKRARPGESTRPRPKDRQQIQDRIKELRGIIPSGGKCSIDSLLDRTIKYMVFLQSVTKYADKLQEPKNPKLIEEANSVVEKNKSVGESDIKGGGGVTWAFEVAGQKMACPIIVEDINHPGQMLIEMLCEDQGLFLEIAEIIRGFGLNILKGKMEIRDNKLWGQFIVEATDRHVTRIDVFWYLVQLLPQTSGASSEMDNHHQKKDMALPAVAMTSSAVKVEVALCSSLAASVKSRKTLHQCAGPTMTKVSKTQSLKYKMKHYNPAVVGKGSWKKTPEFGIGIGSVSSLEFALSNSLLSLIP 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1459 842 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 55 149 IPR025610 -
Acco11g1459 842 MobiDBLite consensus disorder prediction 472 500 - -
Acco11g1459 842 MobiDBLite consensus disorder prediction 533 562 - -
Acco11g1459 842 MobiDBLite consensus disorder prediction 536 562 - -
Acco11g1459 842 CDD ACT_UUR-ACR-like 665 708 - -
Acco11g1459 842 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 546 595 IPR011598 GO:0046983
Acco11g1459 842 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 559 601 IPR036638 GO:0046983
Acco11g1459 842 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 9 751 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1459 Acco-ChrAcco11 29136320 29141643 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1459 463 753 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 42.258 3.99e-63 223