Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1457 ATGCTCTTAATACCACAGCCGTTTTCTGCTATTCCATTTCCTCCCTCCGTGAATGGTTTTAAACATGCCAATTTCAGTTCCAAGCATAAAACACAAACCCAAGCCCAAGTTTCGTCGGCTTGTTCTGTTCTACCCTACAGTGCCTACCAAACGCAAGAAAGTGTGTTCATTGATCTCCAGGTTCTTTCACCAGTTCCTGGCTTTGGCTTCTTGAGTGGAAGATCAAATTCTGCGCTGAATTTTATTGATTACGCGAAACGACGTTTTGGTTCTTTTAAATCCGTGTTAGCTATGGATTCCGGCGCCTGTTTGTCTGATGGCAAGTTTGAGAACGATGATGCTGATGTTGTGGAAAAGGATCCTACTGGACGTTACATTCGGTATGATGATATGTTGGGCAGAGGAGCATTCAAGACTGTATATAAGGCTTTTGATGAAGTTGATGGGATGGAAGTCGCCTGGAGCAAAGTGGATATTGTCCACGTTTTGCAGTCTCGACTTCAATTGGCAATGTTATATTCTGAGGTCCATCTCCTAAAGTCATTGAAACATGAAAAAATCCTCAAGTGCTACAATTCTTGGGTGGACGATAAAAACAAAACTATCAACATGATAACTGAGTTATTCGTCTCTGGGAGTTTGAGGCGATATCGAAGAATGCATAAGAATGTTGAATTGAAGGCCATCAAGAACTGGGCCAGGCAAATACTTCAAGGTTTATGCTATTTGCACAGCCACAATCCTCCTATCATCCACAGAGATTTGAAATGTGATAATATTTTCATTAATGGTAATACTGGAGAAGTTAAGATTGGAGATCTTGGATTGGCAGCTGTCCTACAGCAACCTACTGCACACACTGTCATTGGGACACCGGAATTCATGGCTCCTGAGCTTTATGACGAAGAGTACAATGAACTTGTTGACATATATTCTTTTGGTATGTGCATGTTAGAAATGATAACCTGTGAGTACCCATACAGTGAATGCAAAAATCATGCACAGATATACAAGAAAGTTACCTCTGGAATAAAGCCTGCTGCTCTTGGCAAAGTGAGTGATCCCCAAGTGAGGCAATTCATAGAGAAATGTTTAGTTCCAGCATCTACGAGATTGCCTGCATCTGAGCTATTGAAGGATCCATTTCTTGCTACTGATGACATGAAGGAGGTCAAACGTGAACTGCAGTTGCCCATTCACAAGACACTGCCAACAACTGAGCCACATCCTATGTTAGAAATGATAACCTGTGAGTACCCATACAGCGAATGCAAAAATCATGCACAGATATACAAGAAAGTTACCTCTGGAATAAAGCCTGCTGCTCTTGGCAAAGTGAGTGATCCCCAAGTGAGGCAATTCATAGAGAAATGTTTAGTTCCAGCATCTACGAGATTGCCTGCATCTGAGCTATTGAAGGATCCATTTCTTGCTACTGACGACATGAAGGAGGTCAAACATGAACTGCAGTTGCCCATTCACAAGACACTGCCAACAACTGAGCCACATCCTATGTTAGGAATGATAACCTGTGAGTACCCATACAGCGAATGCAAAAATCATGCACAGATATACAAGAAAGTTACCTCTGGAATAAAGCCTGCTGCTCTTGGCAAAGTGAGTGATCCCCGAGTGAGGCAATTCATAGAGAAATGTTTAGTTCCAGCATCTACGAGATTGCCTGCATCTGAGCTATTGAAGGATCCATTTCTTGCTACTGACGACATGAAGGAGTTCAAACGTGAACTGCAGTTGCCCATTCACAAGACACTGCCAACAACTGAGCCACATCCTATGGAGATAGAACAAAGTGTCAAGGATGTTTTTCCTGGCTTCTGTATGAAAGTTACTGAAGAAACTCCTCAAATATTAACTCTAGAATTCCCTGGGACAAGTGAGGGTACTGGATTCAGGCTACGAGGGCAGAAAAATGCTTCAGATGGAACAATTTCACTAACTCTGCGCATTGCTAAGACAAATGGTCCTGCAAAGAATATCGAATTTCCATTCTATCTTGATTCTGATACAGCAATTTCAATTGCTGAGGAGATGGTAGAAAGTCTGAATCTCCCTGCTGAGGACGAGAGTGTTATTGTTGAACTGATACAAACCATGATTGTCAGGCTTGTTCCTAATTGGAGAGTGTCTCGTCAACAACTATTACCTGGAGCAGATTGTTTGGATGACGATTCTCATATAGTTTTAAATGGGGGATCACCTTTAAGGTGCTATGGTGATGAGGATATTGTTAACTCACAGGTTCTTGAGGAAGATCAAGAGAAGCATGGATCAATCATGCCAGGCATTTCAGCAGAGGATACGATTGCAGTCACAGATGCCAAACATTTAAATACTGATTATACTGTCTTTGATGGAGACTCTGAGGGTTCCATTGCCAAAAGGTCCAATTCAGACTTCAGGCTGTCCGATCAAGATGAATGCAATAGGGAGGGTGATGGTGGTAGATCTGATAGCTCAGCGAGCTCAACTATCACGTTTACAGACTCGTGTGACGATGAGCCCAAGAATTTATACCTGTCAGGCATCAATTTTCTCTCCCTCGCAGACAAAGATCAATGCGACCAGCTGCCACCAGAGCTTGATGCAATAAACATACAGTACCAACTATGCCTTGAACTTGCGAAGATGAGGGAGGATTCCATAGAGAACACACAAAGGAGATGGATTTACTAG 2694 0.4239 MLLIPQPFSAIPFPPSVNGFKHANFSSKHKTQTQAQVSSACSVLPYSAYQTQESVFIDLQVLSPVPGFGFLSGRSNSALNFIDYAKRRFGSFKSVLAMDSGACLSDGKFENDDADVVEKDPTGRYIRYDDMLGRGAFKTVYKAFDEVDGMEVAWSKVDIVHVLQSRLQLAMLYSEVHLLKSLKHEKILKCYNSWVDDKNKTINMITELFVSGSLRRYRRMHKNVELKAIKNWARQILQGLCYLHSHNPPIIHRDLKCDNIFINGNTGEVKIGDLGLAAVLQQPTAHTVIGTPEFMAPELYDEEYNELVDIYSFGMCMLEMITCEYPYSECKNHAQIYKKVTSGIKPAALGKVSDPQVRQFIEKCLVPASTRLPASELLKDPFLATDDMKEVKRELQLPIHKTLPTTEPHPMLEMITCEYPYSECKNHAQIYKKVTSGIKPAALGKVSDPQVRQFIEKCLVPASTRLPASELLKDPFLATDDMKEVKHELQLPIHKTLPTTEPHPMLGMITCEYPYSECKNHAQIYKKVTSGIKPAALGKVSDPRVRQFIEKCLVPASTRLPASELLKDPFLATDDMKEFKRELQLPIHKTLPTTEPHPMEIEQSVKDVFPGFCMKVTEETPQILTLEFPGTSEGTGFRLRGQKNASDGTISLTLRIAKTNGPAKNIEFPFYLDSDTAISIAEEMVESLNLPAEDESVIVELIQTMIVRLVPNWRVSRQQLLPGADCLDDDSHIVLNGGSPLRCYGDEDIVNSQVLEEDQEKHGSIMPGISAEDTIAVTDAKHLNTDYTVFDGDSEGSIAKRSNSDFRLSDQDECNREGDGGRSDSSASSTITFTDSCDDEPKNLYLSGINFLSLADKDQCDQLPPELDAINIQYQLCLELAKMREDSIENTQRRWIY 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1457 897 Gene3D - 648 730 - -
Acco11g1457 897 FunFam Probable serine/threonine-protein kinase WNK1 111 207 - -
Acco11g1457 897 ProSiteProfiles Protein kinase domain profile. 126 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1457 897 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 110 388 - -
Acco11g1457 897 SMART serkin_6 126 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1457 897 SUPERFAMILY Protein kinase-like (PK-like) 411 485 IPR011009 -
Acco11g1457 897 SUPERFAMILY Protein kinase-like (PK-like) 506 614 IPR011009 -
Acco11g1457 897 MobiDBLite consensus disorder prediction 800 832 - -
Acco11g1457 897 SUPERFAMILY Protein kinase-like (PK-like) 120 383 IPR011009 -
Acco11g1457 897 Gene3D Phosphorylase Kinase; domain 1 110 207 - -
Acco11g1457 897 Gene3D Transferase(Phosphotransferase) domain 1 209 391 - -
Acco11g1457 897 Gene3D Transferase(Phosphotransferase) domain 1 505 578 - -
Acco11g1457 897 Gene3D Transferase(Phosphotransferase) domain 1 410 485 - -
Acco11g1457 897 CDD STKc_WNK 124 383 - -
Acco11g1457 897 FunFam probable serine/threonine-protein kinase WNK9 209 388 - -
Acco11g1457 897 MobiDBLite consensus disorder prediction 805 820 - -
Acco11g1457 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Acco11g1457 897 Pfam Protein kinase domain 130 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1457 Acco-ChrAcco11 29122442 29130635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1457 505 896 MAP Kinase Kinase Kinase AT5G41990 36.935 2.62e-58 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Acco11g1457 Pkinase 7.4e-50 CL0016