Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1452 ATGGGAGGAAATCGCAGCAATTATTCTGCTAATCCTTCTGACTACAAGCTTCTCGAAGAGGTTGGTTTTGGTGCGAGCGCCACCGTTTACCGCGCGATCTATATTCCTCTTAATGAACTCGTCGCTGTCAAGTGTTTGGATCTCGATCGCATCAATTCTAATCTGGATGACATACGGAGGGAGGCTCAAACTATGAGTTTGATAAATCACCCTAATGTTGTGAGGTCATTTTGTTCATTTGTTGTTGAGCGAAATCTTTGGGTTGTCATGCCATTCATGGACGAAGGTTCTTGTTTACACCTAATGAAGATAGCGTATCCTGACGGATTTGAAGAGGAAGCTATTGGATCTATTCTAAAAGAAACTCTTAAGGCATTGGAGTACCTTCATCGACAAGGACATATTCATCGTGATGTTAAGGCTGGAAACATTTTACTTGATAGTAAAGGGATTGTGAAGCTTGCTGACTTTGGTGTTTCAGCTTGCATGTTTGATACTGGTGATAGGCAGCGATCAAGAAATACTTTCGTAGGGACTCCTTGCTGGATGGCACCAGAGGTACTGCAACCAGGAAGTGGCTACAATTTCAAAGCTGATATTTGGTCTTTTGGAATTACGGCACTAGAGTTGGCCCATGGTCACGCTCCTTTTTCAAAATATCCTCCTATGAAGGTTCTTCTAATGACCATCCAAAATGCCCCTCCTGGTCTTGATTATGATCGTGATAAAAAGTTCTCCAAGTCTTTTAAGGAAATGGTTGCTATGTGCTTGGTCAAAGATCAAACAAAGAGGCCATCAGCAGAGAAGTTGTTGAAACACTCCTTCTTCAAAAATGCTAAGCCTCCTGAACTTTCTGTGAAGAAACTATTTGCTGACTTACCGCCTCTTTGGAATCGTGTGAAAGCTCTTCAGCTTAAAGATGCTGCTCAACTAGCTCTGAAGAAAATGCCTTCTGCAGAACAAGAAGCATTATCACAGAGTGAATATCAGCGAGGAGTTAGTGCATGGAACTTTGATATTGATGATTTGAAAGCTCAAGCTTCATTGGTAAGGGACGGTGATGATAATTTGGAGATGAGGGAAGAAGATGAAAAGAAGTTCTTCACCAATTATAAGGATGCAGATGACTCTCAATCTGGTACAGGAAAGAAGAATTCAGATAATTTACCTCAGGATGAGTTCACATCACTACCAGATAGTAATGACGTGAAACTGAGTGAGAGCTTGGACAAAAAGGGTAAGATTGTTGAAAGTGATCTTCAGGAACTTGGATCTTCTAAAAATATTATTTGGAAAAGAAATGGATCAGTTTCTGAGGCAACAGCATCCACATTGGAGAAGGATATTGGGACAAGTACGATTAAATTTCAATCAGTGAAAAGTCGTGAGACCCAAAGTGGGCCACTGTCACCTGGAGCTGTGTTTGGTCATTCTTTATCAGAAAGAGGGCGTACATCAGAAAGGTTTGAGAATGAAAATCAGTCATTAGGTGAGAAAGTTAATCGTGAAGTACGAAGAGCTCCAAGCTTTAGTGGTCCTTTGATGCTGCCAAACCGAGCTTCAGCAAATAGTTTATCAGCTCCAATAAAAAGTTCAGGAGGATTCAGAGATTCCTTGGATGATAAGTCAAAGACTAATCTTGTTCAGATAAAAGGGCGATTCTCAGTAACGTCAGAAAATTTAGATCTTGTGAGGGATATTCCTTTAAGTTCAGTCCCACGCCGATCTTCACAGGGATCACCGCTGCGGAAATCTGCCAGTGTTGGTGAATGGATGACAGATTTTAGACAAATGCCAACGGGTCAGTCCGCCAAAGATTCTCTCAATACCAATATTCCTGCATCACTTTTTATGACTCACCTTCAGAATCTTTTCCAGCAGACAACTATTCAACAGGATCTGATATTGAATATGTTAAATAGCATGCAACCAGCTGAGGTAGTTGACGCTTCTTTGAATGGAAAGTCGCCGCCTCCAGGATATCGCAGTTCAGAGAACAATGGAATTGTTGATTCAGCAGCTTCAGAGAGGGAACGCTTGCTGCTGGACAAAATTGCAGAACTACAGGCCAGGTTCATCAATCTGTCAGAGGAATTGACTGCTGAGAAGTTGAAACAGATACAGTTACAACAACAGCTAACATCTCTCTCTGGTCGGGATCAAGGGGACATAAGGGAAGAAGTAGCATGA 2190 0.4169 MGGNRSNYSANPSDYKLLEEVGFGASATVYRAIYIPLNELVAVKCLDLDRINSNLDDIRREAQTMSLINHPNVVRSFCSFVVERNLWVVMPFMDEGSCLHLMKIAYPDGFEEEAIGSILKETLKALEYLHRQGHIHRDVKAGNILLDSKGIVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKNAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWNFDIDDLKAQASLVRDGDDNLEMREEDEKKFFTNYKDADDSQSGTGKKNSDNLPQDEFTSLPDSNDVKLSESLDKKGKIVESDLQELGSSKNIIWKRNGSVSEATASTLEKDIGTSTIKFQSVKSRETQSGPLSPGAVFGHSLSERGRTSERFENENQSLGEKVNREVRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSKTNLVQIKGRFSVTSENLDLVRDIPLSSVPRRSSQGSPLRKSASVGEWMTDFRQMPTGQSAKDSLNTNIPASLFMTHLQNLFQQTTIQQDLILNMLNSMQPAEVVDASLNGKSPPPGYRSSENNGIVDSAASERERLLLDKIAELQARFINLSEELTAEKLKQIQLQQQLTSLSGRDQGDIREEVA 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1452 729 SUPERFAMILY Protein kinase-like (PK-like) 13 331 IPR011009 -
Acco11g1452 729 MobiDBLite consensus disorder prediction 368 408 - -
Acco11g1452 729 MobiDBLite consensus disorder prediction 481 495 - -
Acco11g1452 729 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1452 729 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Acco11g1452 729 Gene3D Transferase(Phosphotransferase) domain 1 96 326 - -
Acco11g1452 729 Pfam Protein kinase domain 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1452 729 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 96 326 - -
Acco11g1452 729 CDD STKc_OSR1_SPAK 13 276 - -
Acco11g1452 729 MobiDBLite consensus disorder prediction 458 495 - -
Acco11g1452 729 MobiDBLite consensus disorder prediction 381 403 - -
Acco11g1452 729 Coils Coil 685 705 - -
Acco11g1452 729 FunFam Serine/threonine-protein kinase BLUS1 4 92 - -
Acco11g1452 729 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Acco11g1452 729 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 7 703 IPR047173 GO:0043539
Acco11g1452 729 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1452 Acco-ChrAcco11 29079548 29087538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1452 8 721 MAP Kinase Kinase Kinase Kinase AT4G10730 64.615 0.0 898
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Acco11g1452 Pkinase 2.4e-60 CL0016