Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1429 ATGAAAGGGCGCTCGCACCGCCTGCAGAGTTCGGACCCTCCCGACGACTGGATTGATGGTTCTTGGACTGTGGATTGCGTATGTGGTGTGAATTTTGACGATGGGGAGGAGATGGTGAATTGTGATGAGTGCGGTGTGTGGGTGCACACGCGTTGCTCGCGATATGTCAAAGGAGATGATATGTTTGTATGCGATAAGTGCAAGAGTAAGATTAATCGATCTGATACGGAGGAAACGGAGGTGGCCCAATTGTTGGCTGAGCTCCCTACGAAGACCGTGAGAATGGAGAGTTCGTTTGCACCCATTGGACCTCCTCGACGTCCTTTCTTGCCTATGGAGGAGAGGGTGCACATTCAAGGAATTCCTGGAGGCGATCCATCCCTTTTTGGTGGGCTATCCTCTATTTTCAATAGGCAGTTATGGAAATGCACTGGGTATGTTCCCAAACAGTTTAATTTTCAGTATAGGGAATTTCCCTGCTGGAATGAGAATTCCACTAGGGAGGAGGATAATGAGAATCCTATTAATAAAGGCGCTGGAGTTCTATTTTCCTTGTCAAAGGAGAGAATATCGGCCACCCCTATTGCGACTTTAGTTGACATGAGGGCTAGGGATGGAGAAGATGGTTCTGATCTGAATAAGTCTCTGAAAGCGATAAAAAAGTGTGATAGTGAAGATGCAGAAGCTATTAGGCGGGTCCAGAATGGCATGAAGAAGGGGAGAAGTTTGCTTCGGTCTGTTATGCATTCAGGTAAGCAGAAAAAAGAAGAGTTAGGGACATCCAAAGATCGCGGTGGGAAGAAGAGGATTAAAACTTCGGACAAAGAGGCAGATCCCAAGAGGAGAACTTCACATACTTCGAAAACAGCATTTACACCCACCAGTGATGCAAAACAATTGGAATTTTATGAAGACAGAGGTCTGAAGAATTTCAAGACTGATACTTGGAGCGTAAAGAGTAAAACTTTGAAAGACATTGTGGTTCAGGAACACGTTTCAAATAATTACTCTGTTGTGGATACCATTATGGAGGAGCCAAATATCAACTCAGCCGCTACTGAGGATTCTTCAGAAGCCTTATATCCTGACACGGCAAGACATAATTTTTCAGCTGGAAGAGAAATAGTAGCAGAGAAAACTGAAAATAAGGATCCTTCTGTTTCTGAAATTTCTTCCAAGATTGATGATAACATTTCACCATATTTGAAGAATAATTCTGCTGGAAATGCTTCAATTAAAGATGAGGAGGGAGATGGCCTGGCGGTTAATAATGCTGATGACATTATAGTAGTAAGAAACACAGTAAGTCCTGCAGAAGAAGATCTTTGTGGTCCTGCACCTCCAGAACACAAGGACAACCAGGATTCCCATGATTTTGACTATGAAACGTGTCATAGCTCTGGACAGATCAATCTTAAGGTGGAGAGAGAAGGGGATAACGATAATTTTGGAAAGGGTCTGATTTCTCATTCTTCTGGCATGAATGATCTGAAAAGTGACGAGGAACTGCCTAAACACAAATCTGATCACCTTAATGACAGTGTGGTGGCCAATTCATCTTATGAAAATAAGGTGGAAGACAGTGACAGGAAATTAGAAGTAATCATTGATTGTCATACCAATAATTCTGAGGCATTATCATGTCATTTTGGTCCTGTAAAGCAAGAAATGGCAGGGTCTGAAGGTCCAACGGAAACCCAGAAGGGTGTTTCAGAAACACAAGATGGTTCTGGCTATGCTGAGGATCCATCAAAATCTGAAACCACATTGTGTCCTCATAAAGGTTCCTCAACCATGAATTCCACAATTCCTGCCAGTGACCAAAAATCTGAGCAGACGGGAATTCCTAATCCTCTTGTCAAGCATGGAGCAATGGAAGATCGCAACTTGTACAATAAGAAAGAAAGTAATCAAAATGATATTGTGAGGGATGAAGTTTCTAGGAAATCTCAAAAAGAACGCCTGAAATCATCTTCAAATCCTAATCTGAAAGCAATGCATTCAAGCAAAAGTGCACAAAATGCTATTTTAAGGCAAGTCAGTGCAGATTCAAAAGATTTTGTTAATAGTTCATCTTCTACAGCATCTTTGGTTCTTCCTACCGGAACTAATTTAGGCTTGAGCAAGTCTGATGAACCATTACTACCCCAAAAGTCATTACAAGCGCCAAATAAGATTTCCTCTTTGGCACCACAGAGAGGTGAAAAGATTAATCAGACAAACCTCCAACCTTCCTCTAAGGTGAACCAGAATCACGTGCCATCACCTTCACCAATATCTAATTCTTCTGCAATGCTAAGTGATGAGGAGCTTGCACTGCTATTGCATCAAGAACTAAATAGCTCCCCGCGAGTTCCTCGTGTACCCCGAGCACGTCATGGGGGTAGCTTGCCCCAGCTAACTTCTCCTAGTGGAGCTAGCATGCTATCAAAGCGCACATCATCCACTGGAGGGAAGGATTATTGTTTGTTTTCTAGGAGAAAATACAAGGATGCATCTAGAGATGGGCTTTGCAGTTCCCGTGAGCTTGAAGATGTATCTAAAAGGATTGAAAATGCATCATCATCCTCTGATCAGAAGAAAAAAGATATGGAATGTCTGGAAGAAGAAGATGCTTCTGTAATGGAAGAACGCCACGCATCTATGACAACCATAAATTCTACAACAAAGAATATTGCTCCGGCCTCTGCCGCCACTGCAAATAGTAGTTCAGCCTCCCCTCCTGAGGATCAAAACTTGTCATTTACTCGCAACTCACCAAAACATATATCTGATGATGATAATGGAACTGCTGGAAGGCCAGCCCATCACACTTTGCCTGGCTTGATCAATGAGATTATGAGCAAGGGTCGTCGGATAACATATGATGAGCTCTGTAATGCTGTGCTGCCACACTGGAATAACTTGAGGAAGCATAATGGAGACCGCTATGCTTACACAAGCCACTCTCAAGCTGTTCTTGATTGTTTGAGGAACCGGCATGAATGGGCAAGGTTGGTTGATCGTGGTCCAAAGACAAATTCTACTAGAAAAAGGCGTAAGTTTGATGAAGAATCTGATGATAATGTAAGTAGCAGGGGCAGAACTGCAAAAGGAGGTGAAGGGAAGAATTTTGAGTTGCAAAAAGAAGAGTTCCCTAAAGGCAAGCGTAAGGCACGGAAGCGCAGGCGTCTTGTTCTTCAGGGGATAGCAGTCAAGGATGCCCGGAGAAGAAAGGTTGGCTCGCTAACTGATGAAGATGTTGGTACATTCTCCAATTCTAGTGAGGAGAGCGAATTTAGCGAGGATGATATTCAGGGTGGCAGAACGGGTCAAGTGGGAAGTGAATCTTCTGCTAGTTCGGATGAGGAAGGCAGCGCCTAA 3363 0.4329 MKGRSHRLQSSDPPDDWIDGSWTVDCVCGVNFDDGEEMVNCDECGVWVHTRCSRYVKGDDMFVCDKCKSKINRSDTEETEVAQLLAELPTKTVRMESSFAPIGPPRRPFLPMEERVHIQGIPGGDPSLFGGLSSIFNRQLWKCTGYVPKQFNFQYREFPCWNENSTREEDNENPINKGAGVLFSLSKERISATPIATLVDMRARDGEDGSDLNKSLKAIKKCDSEDAEAIRRVQNGMKKGRSLLRSVMHSGKQKKEELGTSKDRGGKKRIKTSDKEADPKRRTSHTSKTAFTPTSDAKQLEFYEDRGLKNFKTDTWSVKSKTLKDIVVQEHVSNNYSVVDTIMEEPNINSAATEDSSEALYPDTARHNFSAGREIVAEKTENKDPSVSEISSKIDDNISPYLKNNSAGNASIKDEEGDGLAVNNADDIIVVRNTVSPAEEDLCGPAPPEHKDNQDSHDFDYETCHSSGQINLKVEREGDNDNFGKGLISHSSGMNDLKSDEELPKHKSDHLNDSVVANSSYENKVEDSDRKLEVIIDCHTNNSEALSCHFGPVKQEMAGSEGPTETQKGVSETQDGSGYAEDPSKSETTLCPHKGSSTMNSTIPASDQKSEQTGIPNPLVKHGAMEDRNLYNKKESNQNDIVRDEVSRKSQKERLKSSSNPNLKAMHSSKSAQNAILRQVSADSKDFVNSSSSTASLVLPTGTNLGLSKSDEPLLPQKSLQAPNKISSLAPQRGEKINQTNLQPSSKVNQNHVPSPSPISNSSAMLSDEELALLLHQELNSSPRVPRVPRARHGGSLPQLTSPSGASMLSKRTSSTGGKDYCLFSRRKYKDASRDGLCSSRELEDVSKRIENASSSSDQKKKDMECLEEEDASVMEERHASMTTINSTTKNIAPASAATANSSSASPPEDQNLSFTRNSPKHISDDDNGTAGRPAHHTLPGLINEIMSKGRRITYDELCNAVLPHWNNLRKHNGDRYAYTSHSQAVLDCLRNRHEWARLVDRGPKTNSTRKRRKFDEESDDNVSSRGRTAKGGEGKNFELQKEEFPKGKRKARKRRRLVLQGIAVKDARRRKVGSLTDEDVGTFSNSSEESEFSEDDIQGGRTGQVGSESSASSDEEGSA 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1429 1120 MobiDBLite consensus disorder prediction 656 672 - -
Acco11g1429 1120 ProSitePatterns Zinc finger PHD-type signature. 26 67 IPR019786 -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 1001 1056 - -
Acco11g1429 1120 SMART PHD_3 25 68 IPR001965 -
Acco11g1429 1120 SUPERFAMILY FYVE/PHD zinc finger 14 72 IPR011011 -
Acco11g1429 1120 PANTHER UNCHARACTERIZED 1 1110 - -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 894 938 - -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 708 760 - -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 249 285 - -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 1001 1047 - -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 894 919 - -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 849 876 - -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 1069 1120 - -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 246 293 - -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 495 512 - -
Acco11g1429 1120 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 75 IPR013083 -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 486 522 - -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 1101 1120 - -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 797 817 - -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 626 655 - -
Acco11g1429 1120 Coils Coil 850 870 - -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 554 672 - -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 782 817 - -
Acco11g1429 1120 MobiDBLite consensus disorder prediction 560 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1429 Acco-ChrAcco11 28797983 28803418 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1429 24 67 PHD Transcription Factor Family AT5G22260 42.553 5.10e-06 48.9