Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1425 ATGCGCATTCACGAATCTGATAAAAGTTGGGATAGTGAGTCTGACCTGTCAACAGAAGTGAAAAGGAGAAATGTTGCAAGAGAAATATGTCAAGAAGAAAAAGAAGAAAGTTTGATAGATCTTGGATGTCGATGTCGGGGTGGACTAGCAAAAGCACATCAGACATGCATAGAAACCTGGTTTCGCTCAAGAGGATCAAACACATGTGAGATCTGCCAGCAAGTAGCTCAGAATGTGTCACCTCCTGAATCCCAGCCAAATACTGATTACTGGGTATGGAGGATTGACCCGACAATGAGGACACAGAATCGTGAAAGGGGGTGTTTTAGTCCTCTCTGGCTTGCATTTTCAATTCTCATCGGTGGTCTCTTGTTGGATGTGCTCATATCCGTCACATTTGGTGTCTCTGCACTACCTGTAAACATAATAATTGGTGTTATCATTGTCCTAGGACTTGGCACTGCACTTCGGCTGGCCCTAGAATTCTGCCATGAGTGGGGTTTGAGGAGAGCTATACAGAGGGTGGAAACCAACGTGAGTCATGGGTACCACCCTGCTGTGTAA 564 0.4521 MRIHESDKSWDSESDLSTEVKRRNVAREICQEEKEESLIDLGCRCRGGLAKAHQTCIETWFRSRGSNTCEICQQVAQNVSPPESQPNTDYWVWRIDPTMRTQNRERGCFSPLWLAFSILIGGLLLDVLISVTFGVSALPVNIIIGVIIVLGLGTALRLALEFCHEWGLRRAIQRVETNVSHGYHPAV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1425 187 Pfam RING-variant domain 29 72 IPR011016 GO:0008270
Acco11g1425 187 PANTHER ZINC FINGER, RING-CH-TYPE 29 143 - -
Acco11g1425 187 SUPERFAMILY RING/U-box 27 76 - -
Acco11g1425 187 SMART ringv_2 29 73 IPR011016 GO:0008270
Acco11g1425 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 77 IPR013083 -
Acco11g1425 187 ProSiteProfiles Zinc finger RING-CH-type profile. 19 79 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1425 Acco-ChrAcco11 28775973 28778079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1425 39 79 C3H Transcription Factor Family AT2G37950 60.976 7.57e-12 59.7