Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1420 ATGCCACAAAACTCCATAGCACCAAAACCTCAACACTGCAGTAGTAATAGCCCAGTAGAAGAAGAAGGAGCGCAAGAGATGTCACAGCCCCGCAACTCAATTGTCCTTACCTACCCGGTTCAAACCAATGAACAATCTTTACCAAAATTGAATTTGTACCCAATTACTCTGAAGTTTGAGGAACTGGTTTACAAAGTTAAACTAGAGCAGAAAGGACTGTGTTGGGGTGGTTCATGGAATTCAAAGGAGAAGACCGTATTGAATGGGATTACAGGTATGGTTTGCCCAGGAGAAATACTAGCTATGCTAGGCCCATCTGGAAGTGGGAAAACCACACTTCTCACGGCTCTTGGAGGCCGTCTCAATGGTAAATTATCCGGGAAGATCACATACAACAACCAGCCTTTCTCAGGTTCCATAAAGAGAAGAACAGGTTTTGTGGCTCAGGATGATGTTCTCTACCCTCATCTCACTGTTTTTGAGACCCTATTATTCACTGCACTTTTGAGGTTGCCTAACAGCTTGACTAGAGACGAAAAAGTCGAGCATGTAGAGCGAGTTATCATCGAGTTAGGACTGACTCGGTGCAGGGGAAGCATGATAGGAGGACCACTTTTTAGAGGGATATCAGGTGGAGAGAAAAAGAGGGTAAGCATAGGTCAGGAAATGCTCATCAATCCAAGCCTTTTGCTGCTAGATGAGCCCACTTCAGGTTTGGACTCTACAACAGCTCAGAGGATCATAAACACAATCAAACGTTTGGCTAGCGGAGGTAGAACTGTTGTGACCACCATTCACCAGCCATCTAGTCGTCTCTACTACATGTTTGATAAGGTAGTCTTGTTATCTGAAGGCTGCCCCATCTATAATGGTCCTGCTTCTACGGCCTTGGATTACTTTTCATCCATTGGCTTTTCCACATCCATGACTGTCAATCCAGCTGATCTCTTGCTTGACCTTGCCAATGGGATTGCCCCAGACTCCAAGAATGCAACTGAACAAGGTGAGAGCCTGGAGCAAGAAAGGAAGCTAGTCAGGGAAGCGCTAATTTCTGCTTATGACAAGAACATAGCAACAAAGTTGAAAACTGAGCTTTGCAGCTTGAATATGAACAACTACAATATCACAAAAGATACTCCTGCGAAAAGTGACATAAAACCAGAGCAATGGTGCACAAGTTGGTGGTACCAGTTCAAGGTACTGTTACAGAGGGGCCTAAGGGAGAGAAGGTATGAAGCTTTCAACAGGCTGAGAATATTCCAAGTCATAAGTGTTGCTTTTCTTGGTGGACTCTTGTGGTGGCATACACCAGAATCACACATTCAAGACCGGGTTGCCTTGATCTTTTTCTTCTCTGTTTTTTGGGGATTCTACCCTCTCTACAATGCAGTTTTCACATTTCCTCAAGAAAGAAGAATGCTGATCAAGGAACGGTCATCAGGAATGTACCGCCTTTCGTCCTACTTTCTAGCCAGAACAATAGGAGACTTGCCACTAGAGCTGGCTCTTCCAACTGCATTTGTCTTCATACTCTACTGGATGGGAGGGCTTAAACCTCACCCAGTGACGTTCATCCTTTCCCTACTTGTGGTCCTTTACAGTGTTCTTGTCTCTCAAAGTCTTGGCTTAGCATTTGGAGCTATTCTTATGGAGGTCAAGCAGGCCACGACCTTAGCTTCGGTCACAACCCTTGTATTTCTCATTGCTGGAGGATACTACGTACAACAAATCCCTCCCTTCATAGTGTGGTTCAAGTACCTGAGTTACAGCTACTATTGTTACAAACTTCTTCTCGGTGTCCAGTACAATGACAATGATGTTTATGAGTGCCCAAAGGGTGTATTGTGTAGGGTTGGAGATTTTCCTCCGATCAAATCAATGGGTTTGAACCATCTGTGGGTTGATGTGGCCATCATGGCTCTGATGTTGGTAGGTTATCGACTTGTTGCTTACATGGCACTACATAGAGTGAGGGATGTGCCACTTGATCAGAAGCAAGAAGATAAACTTATGTGTTTTGATCAGCAGAAAAAGTCAGAGATGGCTGTCAAATATCCAAACTCAATAACTCCTAAGGGACTCAATTGTAACCACAAATGTAGAGTGGAAGCTGATAACTTTGGTGGTCCACTTTGGCATCCACATTGCTTAAGCATCACAGGTGAAAGAACCCCTTCACATCACGCGGCAAGGCTTGAATTGGCTCGATCTGTGAATTTAAAGTATGCTTTAGGATTGGACTTTTTTGGGAGCAAAGAATCGATCTTTCTCTTTATCCAATGGTGTTCAAGAGTCTTCACTAATAAAGTGATTCATAACCGAACATACTCTCTCCTAGTCCTAGCTATTCCTTCTTGGATTATATTCTCTCTTGCCCTGCCCTTGTACAATGTGGCAATATGAACGGAAGGATCAGGTTTCGGGAGCGAGTTCGAAGCTGCCGGCAAGTCCGTTCAGAAGGAAATGGACGGCGAGGAAGGAGGTGGTTTAAGGCTGAGCAAGAGATTCTCCGACAAGGACGGAGAGGTAGACTACAAGACCAAGGCCGGCACTGCCTGGAGCCATTCTTATCTGAATCAGAAGCCATGGCACCCTCTTTCCTACCCTAATCAACGCCGTAAGTGGATCGCTGAGCAGACCCACGCCCAGAAACAACGACGTTCCGAGGAGGTTGCTCGTGAGTATGCTCAGGAGCAGGAGTTCTTTCACCAGACTGCTCTCATCTCCAAGAAGGAAAAAGAAAAGGTGGAAATTATGCAAGCTGTTAGCTTCATGTATGTTCGGCCGCCGGGGTACAACGCTGAAAGTGCCAAAGCAGCGGAGATGGCAGATGAGAAGAAGAGAGACGAGCTGACTCAGCCGCCTCAAGATCCAAATGCAAACGCAACATCCTCTTCCATGCCACCTGAAACCTCGCGTGGTATGGACCAATTGGGTGGAGAAAAGAAGAAGCCAAGGCCAAAAGATGTGTTTGGGCGCCATCTACCAACTGAAGAAGAATTTGAAATTCTAAAGAATGCTCCACGGATGGACACAGGAGTTGCTGGCAGGGTGAAACCTTTTGGTGTTGAAGTCCGCAATGTAAAGTGTTTAAGGTGTGGGACTTATGGTCACCAAAGTGGCGATCGTGAGTGCCCATTGAAGGATGTGATAATGCCTAATGAAGAGAGTAGGTTGAAAAGGGATGATCCTTTGAATGCTATCCTTGCCCATGGAGATCCGGATGAGCTTTTAAAGTGGGAGCTGAAGCAGAAGCCGGGAATGAGTCCTCCGCGAGGAGGATTCAATCCAGATGACCCTAACCAGCAGATAGTTGCTGAGGACATATTTGACGAGTATGGAGGTTTTCTTGGTGGTGGCGATATCCCTGAGTTATTGACAGCCTTCTCTAAGAAGCCCAAAAAGAAATCGAAAAAGAACAAGCACAAAAAACGGCAATCAGTACATTCAGAAAATGAAACTTCTTCAGAGGGAGAGGGGAGGTGGAAGAAGAAAAAACCTAAGGTGAGCAGAAGGAAGCAAAAACATTCCAAGTCAAGTTCATCAGACACTTTGGTCTTCGAAAAGGATCAAGAAAATAGCAGGCACAAGCAACCCTGTTCATCAGAAGATTCTGATAGTGATAGGGATGATAGAAGAAGAAATATCAGACAGAAGCAGTCATCTAAAGATTCGGACTATCCCAGGCTTAGGAGCAAGAACAGCAGACAAAAGCATTCTTTTTCATCTGAGGATTCTGATCCTAATGGATACCATGGAAGTCACAAGAAGGGGAGTAAGCACTCTCGTTCTTCTGAAGATTCTGACAGGAACAGTGATGATCTAAGTAGAAAGACTAGACGAAAGCATTCCAATTCAACTATGAGGTCTGGCCTTAATGAACATCATGGGAGTAAAAAGAGCAGAAAAAGACATTCTTATTCGTCAGAGGATGATTTTGGTCCTGATGGGTATCATGGAAAACACGAGAGCAGAAATGAGCGTTCTTATTCATCCGATGGTTCTGACCATCAAAGACATTCGAGGGATAAGACTAAGCATAGACGCGGACACGGATATTACAAGAACAGAGATGAGCATTCTTATCTATCTGGAGATTCTGATAGAGACAGAGACGATCAAAGCAGAAAGACCAAACAAAAGCATCCCAAGCGTGATAGGAGTAAACATAGTAAAAAAGGGCATTCATATTCATCTGAGCCTGAGGATTCTGGTTCTGATAGGTATCATAGAAGTCGAAAAGGCAGGAGTTGA 4254 0.4469 MPQNSIAPKPQHCSSNSPVEEEGAQEMSQPRNSIVLTYPVQTNEQSLPKLNLYPITLKFEELVYKVKLEQKGLCWGGSWNSKEKTVLNGITGMVCPGEILAMLGPSGSGKTTLLTALGGRLNGKLSGKITYNNQPFSGSIKRRTGFVAQDDVLYPHLTVFETLLFTALLRLPNSLTRDEKVEHVERVIIELGLTRCRGSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRIINTIKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYNGPASTALDYFSSIGFSTSMTVNPADLLLDLANGIAPDSKNATEQGESLEQERKLVREALISAYDKNIATKLKTELCSLNMNNYNITKDTPAKSDIKPEQWCTSWWYQFKVLLQRGLRERRYEAFNRLRIFQVISVAFLGGLLWWHTPESHIQDRVALIFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFILYWMGGLKPHPVTFILSLLVVLYSVLVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYVQQIPPFIVWFKYLSYSYYCYKLLLGVQYNDNDVYECPKGVLCRVGDFPPIKSMGLNHLWVDVAIMALMLVGYRLVAYMALHRVRDVPLDQKQEDKLMCFDQQKKSEMAVKYPNSITPKGLNCNHKCRVEADNFGGPLWHPHCLSITGERTPSHHAARLELARSVNLKYALGLDFFGSKESIFLFIQWCSRVFTNKVIHNRTYSLLVLAIPSWIIFSLALPLYNVAIXTEGSGFGSEFEAAGKSVQKEMDGEEGGGLRLSKRFSDKDGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQTHAQKQRRSEEVAREYAQEQEFFHQTALISKKEKEKVEIMQAVSFMYVRPPGYNAESAKAAEMADEKKRDELTQPPQDPNANATSSSMPPETSRGMDQLGGEKKKPRPKDVFGRHLPTEEEFEILKNAPRMDTGVAGRVKPFGVEVRNVKCLRCGTYGHQSGDRECPLKDVIMPNEESRLKRDDPLNAILAHGDPDELLKWELKQKPGMSPPRGGFNPDDPNQQIVAEDIFDEYGGFLGGGDIPELLTAFSKKPKKKSKKNKHKKRQSVHSENETSSEGEGRWKKKKPKVSRRKQKHSKSSSSDTLVFEKDQENSRHKQPCSSEDSDSDRDDRRRNIRQKQSSKDSDYPRLRSKNSRQKHSFSSEDSDPNGYHGSHKKGSKHSRSSEDSDRNSDDLSRKTRRKHSNSTMRSGLNEHHGSKKSRKRHSYSSEDDFGPDGYHGKHESRNERSYSSDGSDHQRHSRDKTKHRRGHGYYKNRDEHSYLSGDSDRDRDDQSRKTKQKHPKRDRSKHSKKGHSYSSEPEDSGSDRYHRSRKGRS 1417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1420 1417 MobiDBLite consensus disorder prediction 1146 1164 - -
Acco11g1420 1417 MobiDBLite consensus disorder prediction 1304 1340 - -
Acco11g1420 1417 Gene3D - 76 303 IPR027417 -
Acco11g1420 1417 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 27 651 - -
Acco11g1420 1417 SMART AAA_5 96 286 IPR003593 GO:0016887
Acco11g1420 1417 MobiDBLite consensus disorder prediction 1393 1410 - -
Acco11g1420 1417 SMART Cir_N_3 862 898 IPR019339 -
Acco11g1420 1417 MobiDBLite consensus disorder prediction 976 996 - -
Acco11g1420 1417 MobiDBLite consensus disorder prediction 936 996 - -
Acco11g1420 1417 MobiDBLite consensus disorder prediction 1 34 - -
Acco11g1420 1417 FunFam ABC transporter G family member 22 74 303 - -
Acco11g1420 1417 Pfam ABC-2 type transporter 396 602 IPR013525 GO:0016020|GO:0140359
Acco11g1420 1417 MobiDBLite consensus disorder prediction 1352 1379 - -
Acco11g1420 1417 Pfam N-terminal domain of CBF1 interacting co-repressor CIR 863 898 IPR019339 -
Acco11g1420 1417 CDD ABCG_EPDR 54 291 - -
Acco11g1420 1417 MobiDBLite consensus disorder prediction 1176 1295 - -
Acco11g1420 1417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 303 IPR027417 -
Acco11g1420 1417 MobiDBLite consensus disorder prediction 1081 1417 - -
Acco11g1420 1417 ProSitePatterns ABC transporters family signature. 209 223 IPR017871 GO:0005524|GO:0016887
Acco11g1420 1417 Pfam ABC transporter 87 237 IPR003439 GO:0005524
Acco11g1420 1417 MobiDBLite consensus disorder prediction 954 972 - -
Acco11g1420 1417 Pfam ABC-2 type transporter 266 344 IPR043926 GO:0140359
Acco11g1420 1417 MobiDBLite consensus disorder prediction 939 953 - -
Acco11g1420 1417 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 57 309 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1420 Acco-ChrAcco11 28692888 28707638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1420 86 285 Calmodulin-binding Proteins AT2G36910 29.717 1.26e-11 67.8