Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1399 ATGGGAGCTGGGTGCCCTCCAATCATTATTCAATGTGACAACTACATTGTATTCTTAAATCTTATTTGTTCCTACGGGGGCCAGCTTTCCAAATTTATCAATGGAGTGATACCTGCTAGAGGAACAATGGACTGGGCATTTGTTCATAAAACATGGGATAAGTGGTCTTCTACTAGCATTGGTTCTTCTGGTCAACCTTTAAAAGCTGCTTTGCTGATAAACTATGACCCATATGGACCATCACGCCTATTGTCTACGATTGCTGAACAAGAAGGAATTAAAGCCAACCCCATCGAATTGAATCACTTTGTTGACTACATTAAACATAACAAACTCCAGACAGCAAGCTTCATTATTGGGCCCCATCAATACTTGGTCACATCAATTCATGAGAATTGGTTTAGTGCCAGGTGCATGAACACATCAAAACCTGCTGGTGAAGGAGCAATTGTAATGCAGACAGCAGCATATATCTTCGTTGCTCTGTATGAAGGTTCCATTGGTTCAGCATCTCGTGCTATGGCTGCTGCTGATCAGTTTGTTTGGCAATTGGCGCGAAGCTGGAAAACAAGCCCATTACTACTGTTCCAGAATGAAGAACTTTCAATACCCTGCCTTCTTGGCCATACTATTTTCCATGACAACAACCGTCATGAGAAAACGCCAGTGTCTCTTGTCTTCTCCATGGGATCCGGTGGTAGTAAAGCCGTTGCTTCTTGCAATTCTTCGTCAACATCGTCGTCTTCGGGCAGTTTTCGTAAGGGTCGATCTAGAGGGCATAGAGGTTTTCAGTCGTATTGTTTAGGAACAACATCTGGATCTCATGACAGTGACAATGACGACCAGGTGTGTGATCAAAACAAAGAAAACGATAGTAATGTTACATACTCCAATGGTGATGAAACTGATCCAGATGAGATGATATCAGAGTCTTTCAGAAAGATCGAATCGGATAAAATGCCATGTTTCCCTGCTAATGTCCACCTTGATGAGTGGAATCAAACAGGCAATTCCAATACTGCATCTAGAACTGGTAGCAGTTCTGATCGTCCAGCTTCAACTCAGTCCTCGAACCCTTCAAGTCGATTTCTTTCTCGGTTTAGCCTTATTCCTGGTAATGTAAGCTTCAGATTAAGCCGAACCACAAGTTTGGGGTCATCACAGCCTTGCCCTGTTTCTTCTGCTGGTCTCTCAATATTTAACAGTGAAGATGACCTTAATCCACAGCCTGGGCCTACTGGAAGCTTGGCTAATCAAAATGAAGCTGTACAATGCAGTGACTTGCTTCCTGCGTCACAATGCCATGAAGACACTTCTATTAATTTAAGGTCTTCATCGGATTCCTATGGCAACCTGCAAAACAATTCAACAAATTCTTCTATGCAGAATATGAGTAGAGATGAAAATGGTGTGAGAGAAGGGTTCAGTATTAACTTATTTTCTCCAAGACTCCATGCTAGAACAGAAAATGTTGAAATGAGACAAAATGATCACAGAAATGGAACTCGAGAACCTGTTGAACGGAATGTTCGCTTTAGTCGTACTTTGAGCGTTGGAAGACTTCGTGATAGGGTTCTTCGTCGATCAACAGTATCAGACTTCACTTTTTGCCCGCTGCAACAAGAAAGCAATGTGACAGATGCTAGTCAAGATATTGGAAGACAAGCAGGGGAGAGGGAGTCAATAGTGCTACCATCTGATAGTGACTCTACAAGTTTACCTTCTACCTCTGGATATCCTCCATCCAATATATCCAGCTCCTTGTTTGGCATCCAAGACTATGAGGTTGAGTCTTCACGAACAAGAGAAGCTAGGTATCGTGATCTACTGGAAAATAGATCCAATTTCCTAGAACGGAGAAGAAGAATACGATCCCAGGTCCGTGCTCTTCAACGATTGGGCAGCCGATTTGAAAACCTGTCTGGGCATGACAGGTCATGTATTTTGTCTGGCCAACATAGAAATGGCCGTTGTACATGCCGAATTAGTAGTCGTGATGCCAATGCTAATGATGATACTGGGGCTAGAGCTAGCATATCAAGAATTGTTATGCTTGCTGAAGCCTTGTTTGAGGTTCTGGATGAAATTCACCAGCAATCAGTGGTTCTGTCTTCCCGCCCTTCTGTTTCTTCTATTGGATCTGTTCCTGCACCTTATGAAGTTGTAGAAGCCTTGCCTGTCAAATTATACAGAAAGTTGCATAAACATCAGGAGGATGCTGCTCAATGCTACATATGCCTTGTGGAGTATGATGATGGAGACAGCATGCGAGTACTGCCTTGTCATCATGAATTTCATGTAACATGCATAGACAAGTGGCTAAAGGAGATTCACAGGGTATGCCCACTATGCCGTGGGGACATCTGCGCTGCTGATTCTATACCAGCCGGGAACTGA 2397 0.4314 MGAGCPPIIIQCDNYIVFLNLICSYGGQLSKFINGVIPARGTMDWAFVHKTWDKWSSTSIGSSGQPLKAALLINYDPYGPSRLLSTIAEQEGIKANPIELNHFVDYIKHNKLQTASFIIGPHQYLVTSIHENWFSARCMNTSKPAGEGAIVMQTAAYIFVALYEGSIGSASRAMAAADQFVWQLARSWKTSPLLLFQNEELSIPCLLGHTIFHDNNRHEKTPVSLVFSMGSGGSKAVASCNSSSTSSSSGSFRKGRSRGHRGFQSYCLGTTSGSHDSDNDDQVCDQNKENDSNVTYSNGDETDPDEMISESFRKIESDKMPCFPANVHLDEWNQTGNSNTASRTGSSSDRPASTQSSNPSSRFLSRFSLIPGNVSFRLSRTTSLGSSQPCPVSSAGLSIFNSEDDLNPQPGPTGSLANQNEAVQCSDLLPASQCHEDTSINLRSSSDSYGNLQNNSTNSSMQNMSRDENGVREGFSINLFSPRLHARTENVEMRQNDHRNGTREPVERNVRFSRTLSVGRLRDRVLRRSTVSDFTFCPLQQESNVTDASQDIGRQAGERESIVLPSDSDSTSLPSTSGYPPSNISSSLFGIQDYEVESSRTREARYRDLLENRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGRCTCRISSRDANANDDTGARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPYEVVEALPVKLYRKLHKHQEDAAQCYICLVEYDDGDSMRVLPCHHEFHVTCIDKWLKEIHRVCPLCRGDICAADSIPAGN 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1399 798 FunFam Putative RING zinc finger domain superfamily protein 712 790 - -
Acco11g1399 798 MobiDBLite consensus disorder prediction 329 364 - -
Acco11g1399 798 MobiDBLite consensus disorder prediction 238 306 - -
Acco11g1399 798 MobiDBLite consensus disorder prediction 395 418 - -
Acco11g1399 798 SUPERFAMILY RING/U-box 721 790 - -
Acco11g1399 798 MobiDBLite consensus disorder prediction 564 584 - -
Acco11g1399 798 ProSiteProfiles Zinc finger RING-type profile. 743 785 IPR001841 -
Acco11g1399 798 MobiDBLite consensus disorder prediction 238 253 - -
Acco11g1399 798 MobiDBLite consensus disorder prediction 441 467 - -
Acco11g1399 798 Pfam Ring finger domain 742 785 IPR001841 -
Acco11g1399 798 MobiDBLite consensus disorder prediction 330 364 - -
Acco11g1399 798 Pfam Profilin 51 181 IPR005455 GO:0003779
Acco11g1399 798 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 707 790 IPR013083 -
Acco11g1399 798 MobiDBLite consensus disorder prediction 288 302 - -
Acco11g1399 798 MobiDBLite consensus disorder prediction 559 584 - -
Acco11g1399 798 SUPERFAMILY Profilin (actin-binding protein) 52 184 IPR036140 -
Acco11g1399 798 SMART ring_2 743 784 IPR001841 -
Acco11g1399 798 Gene3D Dynein light chain 2a, cytoplasmic 51 187 - -
Acco11g1399 798 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 229 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1399 Acco-ChrAcco11 28323475 28337196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1399 461 792 C3H Transcription Factor Family AT5G45290 60.117 5.19e-111 347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1399 11 28323475 28337196 Acco11g1399 11 28323475 28337196 ECH