Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1397 ATGATACCTGCTAGAGGCACAATGGACTGGGCATTTGTTCATAAAACATGGGATAAGTGGGCTTCTACTAGCATTGGTTCTTCTGGTCAACCTTTAAAAGCTGCTTTGCTGATAAACTATGACCCATATGGGCCATCACGCCTGTTGTCTACAATTGCTGAACAAGAAGGAATTAGAACCAACCCCATCGAATTGAATCACTTTGTTGACTACATTAAACATAACAAACTTCTGACAGAAAGCTTCATTATTGGGCCCAATCAATACTTGGTCACATCAATTCATGAGAATTGGTTTAGTGCTAGGTGCATGAACACTTCAAAGCCTGCTGGTGAAGGAGCAATTGTAATGCCGACAGCAGCATATATCTTCGTTGCTCTGTATGAAGGTTCCATTGGTTCAGCATCTCGTGCTATGGCTGCTGCTGATCAGTTTGTTTGGCAATTGGCGCGTAAAAATCTTTAG 465 0.4194 MIPARGTMDWAFVHKTWDKWASTSIGSSGQPLKAALLINYDPYGPSRLLSTIAEQEGIRTNPIELNHFVDYIKHNKLLTESFIIGPNQYLVTSIHENWFSARCMNTSKPAGEGAIVMPTAAYIFVALYEGSIGSASRAMAAADQFVWQLARKNL 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1397 154 PANTHER OS05G0241400 PROTEIN 8 154 - -
Acco11g1397 154 Gene3D Dynein light chain 2a, cytoplasmic 16 153 - -
Acco11g1397 154 Pfam Profilin 16 152 IPR005455 GO:0003779
Acco11g1397 154 SUPERFAMILY Profilin (actin-binding protein) 17 151 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1397 Acco-ChrAcco11 28315321 28318473 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1397 4 154 Carbohydrate Esterase AT4G19410 67.105 6.96e-72 223