Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1387 ATGAAGCAGCCTTCGAAATCGAGGCCATGGAGGCCACTCACGGCCAATTGCTGCTCCACGAAGGACCAAACCAAGATCGGAAACTTCATTCGATGCAAGCCTACTTCACGGTCGGATTTGTCCAAGGATGTTGCTCCGATGCCGTCGTTCCGGAGGCTTTCGTTCTCGGATCTGAGCCGGTCGTCGTCGATGCGAATCAACGAGGATCTGGCGCAGTCGTTCGGGTCGGAGCTACACGATTTTCAGCTGAGCGAATTGAGAGCCATAACGCAGAATTTCTCGAGCAATTTCTTGCTGGGAGAAGGAGGGTTCGGGACTGTGCATAAGGGCTACATCGATGATAACTTCCGGCAAGGGTTGAAGGCTCAGCCCGTCGCCGTTAAGCTTCTCGACATTGAAGGCTTGCAAGGACACCGTGAATGGCTTGCAGAAGTAGTATTTCTTGGGCAGCTGAGGCACCCAAACTTGGTGAAGTTGATAGGATATTGTTGTGAAGAAGAGGAACGGCTCCTTGTGTACGAGTTCATGCCAAGAGGAAGCTTGGAGAATCACTTGTTCAGAAGGATATCATCACTGCCTTGGGCAACAAGACTGAAAATTGCAATGGGTGCTGCTAAAGGCCTTTCCTTCTTGCATGGCGCAGAGAATCCAGTCATTTACAGGGACTTTAAAACTTCCAATGTCTTGCTTGATTCTGATTTCACAGCAAAGTTGTCAGATTTTGGATTAGCCAAAATGGGGCCAGAGGGATCGAAATCTCATGTCACAACCAGAGTCATGGGTACTTATGGATATGCAGCCCCTGAATACATATCTACGGGTCACTTAACCACAAAAAGCGATGTCTATAGCTTTGGGGTAGTCCTGCTAGAACTACTCACAGGAAGGAGAGCAACGGAGAAGACAAGGACAAAGACAGAGCAGAGCCTTGTGGATTGGTCAAGACCTTATTTGAGCAGTTCAAGGAAGTTGAGGTATATTATGGATCCAAGACTTGCAGGGCAATACTCTGTGAAGGGTTCAAAGGAGATGGCTCGTTTGGCACAGCAATGCATAAGTCTGAATCCTAAAGACAGGCCAAGGATGGCAACCATTGTTGAAACCCTTGAAAACTTGCAGCAGTACAAAGACATGGCTATTACCTGTGGACACTGGCCTGCTTCAGCAAAATCTAGAAAGGGTGCTTCTGATAATAAGATCAAAATTGATATCAGAGTTGGTGCAAACCCCAGGAAGCCCACTCCTTTAGTACATCTTCATGGGGAAATAGTGATATGCTATGATGACTCTTTCTTTCTTAATGAGTTCGACTGGAATTTTTCAGACCTTGTGACAATTAAAATCTCTCAGGTGCATGCATACCTGCCTCCCCAAAATCCTCTGTTTTTTACCCTCTTAGTCTTCCTCATTTTCTGTGTGGACGGACACCATCAGAATGCAAAATCCAAAATCAATCAAACACAACCTATGCCAATAATTTCAGAATCTCCAGAAGAAGAAGAAGAAATGGCGTCAAACAACAAATTCAGAAAACCCAGTTCTTCTTTTCAATACAGCCTCTGCACTACTCTGTTCTTCATTGTTCTCTTTATCATACCTGCCCTGTTCCTCCTCCACAGCCCCACCACCACCTCCATATGCACCACCTTCGGCAACCATGTCAAGACTTGGTCCGGTGACCTTCGCTTAGCTGAGTTCTCATGGAACCGCTTGAAATTTTTTCAAGACCAGCCTCCATCAATGACTTTGAAAATCGCTGTCTTCTCTCGGAAATGGCCTATTGGCACCACCCCAGGTGGCATGGAGCGCCATGCTTACACTCTTCATACAGCCTTAGCTAGTCGAGGTCATCAAGTTCATGTCTTTACCTCTCCCCAAGATGAAGGCAATTCAATTTCATCAAACAATCATCAAGTTGGTGCACCTTCTTCACCTCACATTCATTGCCATGAGGGTGAACCAGGAAGGTGGAGATACAACAAAGCTTGGGAACAATTTCAGGAAGAAAACAAAAGAGAACCCTTTGATGTTGTTCACTCAGAAAGTGTAGCACTTCCTCACTGGCTTGCTCGTAACCTTTCAAATCTTGCAGTTTCATGGCATGGCATAGCCTTAGAGAGCCTGCAATCTGATATATTCCAAGACTTGGCTAGGAGGCCTGGTGAGCCAACATCCCCTGCTTTCACCGAAACCTTAAAAGGGGTTGTACCTAAAGTTCTGAACGAGATAAGATTCTTCCATAATTATGCACACCATGTAGCTATTAGTGATAGCTGTGGTGAGATGTTAAGGGATATTTATCAGATTCCCAGAAGAAGAGTCCATGTGATTCTAAATGGCGTTGATGATGGTGACTTCAGGGAAGATGCAGAATTGGGGAAACAATTCAGATCCAAAATTGGCATTCCTAGTGATGCAGGTTTAGTACTAGGTGTGGCTGGAAGATTGGTGAAGGACAAAGGACATCCTCTGCTTCATGAAGCATGCTCTAAGCTAATAACCAAGCACCCAAATGTTTACTTGATTGTTGCTGGTTCAGGACCATGGGAGAATAGGTACAAGGATTTAGGAGGCCAAGTTCTTGTACTAGGATCTATGAGTCCGTCCATGTTAAGAGCATTCTATAATGCTATAGACATTTTTGTGAATCCCACACTTAGGCCACAAGGACTTGATCTTACTCTAATGGAGGCAATGATGAGTGGGAAGCCCCTTTTGGCTTCGAGATTTCCAAGCATCAAAGGTAGTGTGGTTGTTAATGAAGAGTTTGGCTTTATGTTCTCTCCAAATGTGGAGTCACTGTTGGAGTCACTTGAAGCTGTGGTGAAGGAAGGTCCAGAGAGGCTAGCAAGAAGGGGAAAAGCATGCCGTGAATATGCTACTTCCATGTTCACGGCTACAAAGATGGCATTGGCATACGAGAGGCTGTTCCAATGTATAAAAGATGAAGCATTTTGTGCCTATACTTGA 2970 0.4529 MKQPSKSRPWRPLTANCCSTKDQTKIGNFIRCKPTSRSDLSKDVAPMPSFRRLSFSDLSRSSSMRINEDLAQSFGSELHDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYIDDNFRQGLKAQPVAVKLLDIEGLQGHREWLAEVVFLGQLRHPNLVKLIGYCCEEEERLLVYEFMPRGSLENHLFRRISSLPWATRLKIAMGAAKGLSFLHGAENPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRATEKTRTKTEQSLVDWSRPYLSSSRKLRYIMDPRLAGQYSVKGSKEMARLAQQCISLNPKDRPRMATIVETLENLQQYKDMAITCGHWPASAKSRKGASDNKIKIDIRVGANPRKPTPLVHLHGEIVICYDDSFFLNEFDWNFSDLVTIKISQVHAYLPPQNPLFFTLLVFLIFCVDGHHQNAKSKINQTQPMPIISESPEEEEEMASNNKFRKPSSSFQYSLCTTLFFIVLFIIPALFLLHSPTTTSICTTFGNHVKTWSGDLRLAEFSWNRLKFFQDQPPSMTLKIAVFSRKWPIGTTPGGMERHAYTLHTALASRGHQVHVFTSPQDEGNSISSNNHQVGAPSSPHIHCHEGEPGRWRYNKAWEQFQEENKREPFDVVHSESVALPHWLARNLSNLAVSWHGIALESLQSDIFQDLARRPGEPTSPAFTETLKGVVPKVLNEIRFFHNYAHHVAISDSCGEMLRDIYQIPRRRVHVILNGVDDGDFREDAELGKQFRSKIGIPSDAGLVLGVAGRLVKDKGHPLLHEACSKLITKHPNVYLIVAGSGPWENRYKDLGGQVLVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGSVVVNEEFGFMFSPNVESLLESLEAVVKEGPERLARRGKACREYATSMFTATKMALAYERLFQCIKDEAFCAYT 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1387 989 FunFam Serine/threonine-protein kinase BIK1 60 175 - -
Acco11g1387 989 CDD STKc_IRAK 99 372 - -
Acco11g1387 989 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 584 978 - -
Acco11g1387 989 Gene3D Glycogen Phosphorylase B; 797 961 - -
Acco11g1387 989 CDD GT4_PimA-like 584 978 - -
Acco11g1387 989 Pfam Glycosyl transferases group 1 809 954 IPR001296 GO:0016757
Acco11g1387 989 Gene3D Transferase(Phosphotransferase) domain 1 176 384 - -
Acco11g1387 989 Gene3D Phosphorylase Kinase; domain 1 56 175 - -
Acco11g1387 989 SUPERFAMILY Protein kinase-like (PK-like) 74 371 IPR011009 -
Acco11g1387 989 Gene3D Glycogen Phosphorylase B; 580 796 - -
Acco11g1387 989 Pfam Glycosyltransferase Family 4 599 783 IPR028098 -
Acco11g1387 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Acco11g1387 989 ProSiteProfiles Protein kinase domain profile. 93 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1387 989 FunFam Serine/threonine-protein kinase PBS1 176 382 - -
Acco11g1387 989 PANTHER GLYCOSYLTRANSFERASE 518 988 - -
Acco11g1387 989 ProSitePatterns Protein kinases ATP-binding region signature. 99 128 IPR017441 GO:0005524
Acco11g1387 989 Pfam Protein tyrosine and serine/threonine kinase 99 369 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1387 Acco-ChrAcco11 28201578 28207762 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1387 484 988 Glycosyltransferase AT4G19460 63.178 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco11g1387 PK_Tyr_Ser-Thr 5.3e-48 CL0016