Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1375 ATGGCCGACGAAAATTCTCCCCTCTCCACCGCCAATGTCTCCGTCGTACTCATCGCCTTGGGCTCCGCCGCCTTCGTTGTCACAATGTACCATCTAATTGCCGTTTGCGTCTGCGGCCACCATCTCACCGACCCTAACTCTGACCAGCCGCCTAACGGCGATATTCAGTTCTCGTCGAGCATCATCGACGAGAATTCTTTGGCGCAGCTAATTCCGGCACACAAGTACAAGAAGAAGATCGACGGCGACAGCGATGGTCCCGAGGTGACCTGTGCGGTGTGCTTGGGAGATTTCGAGGAAGACGAAGAGGTGAGAACGTTGCCAGAGTGCTCGCACTCTTTTCACGTGCCTTGCATCGATACGTGGCTCTTGTCTCGCCCGAATTGTCCCGTCTGCCGCGCCGATGCCACGCCGTCTCCGGTGGTTCTGAGCACCGTGTCGGAGCCTGTTGCCGGTGAATCGAATTCGATGGCGACTGACCAACGGATAAATATTGTGCAAAATGCTTTGATGCAGAGTGTCATGTTGCGACGGTGA 537 0.5568 MADENSPLSTANVSVVLIALGSAAFVVTMYHLIAVCVCGHHLTDPNSDQPPNGDIQFSSSIIDENSLAQLIPAHKYKKKIDGDSDGPEVTCAVCLGDFEEDEEVRTLPECSHSFHVPCIDTWLLSRPNCPVCRADATPSPVVLSTVSEPVAGESNSMATDQRINIVQNALMQSVMLRR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1375 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 139 IPR013083 -
Acco11g1375 178 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 10 137 IPR044675 -
Acco11g1375 178 ProSiteProfiles Zinc finger RING-type profile. 91 133 IPR001841 -
Acco11g1375 178 SUPERFAMILY RING/U-box 84 139 - -
Acco11g1375 178 CDD RING-H2_EL5-like 91 133 - -
Acco11g1375 178 Pfam Ring finger domain 90 133 IPR001841 -
Acco11g1375 178 SMART ring_2 91 132 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1375 Acco-ChrAcco11 28044025 28044561 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1375 15 156 C3H Transcription Factor Family AT5G17600 42.949 7.03e-26 99.8