Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1357 ATGGAGTTCAGTGAGCATGAGAGCGTGACAGTTCGAGAAGTCTGTGCAAATGGAAGTTGCACGGGAACATCTGAAGTTGAAGCAAGGCTTGATGAAGGAGATATTCAAGAGGCAGAATCTTCATTGCGAGAAGGGTTATCACTCAATTTTGAGGAAGCAAGAGCACTTCTGGGGAAGTTGGAGTATCAGAGAGGGAACGTGGAAGGTGCTTTTCGTGTATTTGATGGGATTGATCTCCAAGCTGCCATACAGCGATTACAACCTTCCCTTCCTGAAAAACAATTTACCAAGAAGGGGCGCAATCGTTCTGAACCACCTCCTTCAGTCTCTCAGCATGCTGCTAGTTTGGTGCTTGAAGCCATCTACTTGAAAGCGCGTTCGCTACAAACTCTAGGGAGATTAACTGAAGCTGCAAATGAATGCAAAAGTGTGCTTGATGCTGTTGAGAAGATATTTTATCAGGGTATACCTGATATTCAAGTGGACAATAGATTGCAAGAGATAGTCAGCCATGCTGTAGAACTCCTTCCAGAGCTTTGGACACAGGCTGGTTGCTATCATGAGGCGATATCTGCCTATAGGCGTGCCCTTCTTAGTCATTGGAATCTAGATAATGATTGCTGTGCAAGAATCCAGAAAAATTTTGTTGTATTTTTGTTGTACAGTGGGGTAGAGGCTAGCCCACCCAGTTTAGGGGTTCAGATTGATGGGTCGTATGTGCCTAAAAATAATTTGGAAGAGGCTATTCTGCTTCTTATGATTCTTATCAGAAAGTTTTGCATTGGTAAGGCCAAATGGGACCCATCAGTGATGGAGCACCTGACTTTTGCACTTTCTGTATGTGGGCAAACGTCTGTTTTGGCTAAGTCACTTGAAGAGCTAATGCCTGGAGTATATAATCGGATTGATCGTTGGAATTATTTAGCTTTATGTCATAGTGGAGCTGGTCTTAACAGAAGTGCTTTGAATCTACTGCAGAGGTCTCTGGACAATCATGCTCGACCTGACGAGGTTATGTCACTGCTATTGGCTGCCAAGATCTGCAGTGAGGATCCTCAACTTGCTCCTGAGGGAGTAGGTTATGCACAAAGGGCAATCACAAGTGCTCAGGGACCAGATGAGCATCTTAAAGGAGTGGGTCTCCAAATGTTGGGACTTTGTCTTGGAAGGCAAGCTAAGGCTGCTTCCTCTGATTCTGAGAGGTCTCACCTTCAGTCCAAAGCTTTGAAATCATTGGAGGAGGCAGCGAGATTGGAGCCAAAAAATTCTGATCTGACTCTTGAGTTGGCTGTTAAATATGCAGAGCACCGAAATTTGACCACTGCTTTATGCTATGCGAAGAAATTCTTTGATGAAACAGGTGGCTCAGTATTAAAAAGTTGGAGAATGCTTGCTCTAGTTTTGTCTGCTCAACAAAGATTTTCAGAGGCTGAGGTGGTAATAGATGCAGCTCTTGATCAAACTACAAAATGGGAACAGGGGCCACTACTTAGGCTGAAAGCAAAGATGAAGATCTCCCAATCACAGCACACAGATGCTATTGAAACATATCGGTACCTCCTTGCATTGGTTCAAGCCCAGAGAAAATCCTTTGGTTCACTCTTCACTAATTCACAGGTTGATGATGGTAAAGTAAATGAATTTGAGATTTGGCATGGTCTGGCAAGTCTATATGCTAGTCTTTCTCATTGGAGAGACGCTGAAATATGTTTGCAGAAGGCCAAAGTGTCGAAGCCCTATTCTGCAGCATTGATGCACACCAAAGGTGTAATTTTTGAAGGACGTGAAGAAGATAGAGCTGCTCTTGGTGCTTTCTTTAGTGCATTCATGCTTGATCCAAGCTATGTTCCAAGCAAGATCTTGTTGGGTTCTCTGATGCTAAAACTCAGTTCAAAGGGCTTGCCTGTGGCTAGAGGCTTACTTTCTGAAGCTCTAAGAATAGACCCCACTAACCACAAGGCTTGGTATTATATGGGTATGGTTAACAAAGAGGATGGCCGGATGAGTGATGCTGCTGACTGCTTCCAGGCAGCTTCCATGCTTGAAGAATCGGATCCGATCGAAAGTTTCAGCTCTGTTCTTTGA 2085 0.4398 MEFSEHESVTVREVCANGSCTGTSEVEARLDEGDIQEAESSLREGLSLNFEEARALLGKLEYQRGNVEGAFRVFDGIDLQAAIQRLQPSLPEKQFTKKGRNRSEPPPSVSQHAASLVLEAIYLKARSLQTLGRLTEAANECKSVLDAVEKIFYQGIPDIQVDNRLQEIVSHAVELLPELWTQAGCYHEAISAYRRALLSHWNLDNDCCARIQKNFVVFLLYSGVEASPPSLGVQIDGSYVPKNNLEEAILLLMILIRKFCIGKAKWDPSVMEHLTFALSVCGQTSVLAKSLEELMPGVYNRIDRWNYLALCHSGAGLNRSALNLLQRSLDNHARPDEVMSLLLAAKICSEDPQLAPEGVGYAQRAITSAQGPDEHLKGVGLQMLGLCLGRQAKAASSDSERSHLQSKALKSLEEAARLEPKNSDLTLELAVKYAEHRNLTTALCYAKKFFDETGGSVLKSWRMLALVLSAQQRFSEAEVVIDAALDQTTKWEQGPLLRLKAKMKISQSQHTDAIETYRYLLALVQAQRKSFGSLFTNSQVDDGKVNEFEIWHGLASLYASLSHWRDAEICLQKAKVSKPYSAALMHTKGVIFEGREEDRAALGAFFSAFMLDPSYVPSKILLGSLMLKLSSKGLPVARGLLSEALRIDPTNHKAWYYMGMVNKEDGRMSDAADCFQAASMLEESDPIESFSSVL 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1357 694 Gene3D Tetratricopeptide repeat domain 536 687 IPR011990 GO:0005515
Acco11g1357 694 Gene3D Tetratricopeptide repeat domain 25 226 IPR011990 GO:0005515
Acco11g1357 694 Gene3D Tetratricopeptide repeat domain 237 534 IPR011990 GO:0005515
Acco11g1357 694 PANTHER PROTEIN NPG1 5 691 IPR043376 -
Acco11g1357 694 ProSiteProfiles TPR repeat profile. 652 685 IPR019734 GO:0005515
Acco11g1357 694 SMART tpr_5 458 491 IPR019734 GO:0005515
Acco11g1357 694 SMART tpr_5 548 581 IPR019734 GO:0005515
Acco11g1357 694 SMART tpr_5 494 527 IPR019734 GO:0005515
Acco11g1357 694 SMART tpr_5 302 335 IPR019734 GO:0005515
Acco11g1357 694 SMART tpr_5 652 685 IPR019734 GO:0005515
Acco11g1357 694 SMART tpr_5 118 151 IPR019734 GO:0005515
Acco11g1357 694 SMART tpr_5 582 615 IPR019734 GO:0005515
Acco11g1357 694 SUPERFAMILY TPR-like 407 678 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1357 Acco-ChrAcco11 27855865 27859136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1357 2 694 Calmodulin-binding Proteins AT2G43040 71.897 0.0 984