Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1350 ATGGATAATAAACCAAAGTCCGATCAGGTTGTTCTCTTCATCGACCACCTCAACGCTAGTCCTCCCTCCACGGAAACTCATCACAACAACATCAACGACAACACCTCCACCAACGACAAGCCCAAACTCACTTCTAGAGTCAAAACCCTCAATCGCCTCAGCTTCTCCAAACCCAAATCTCGCATCCAAGAAAACAACCACCCACTACTCTACACCAACTACGCCGTCCCCGAAGAAGCCCAAGACCCTTCCTGGTATTCTTCCACCGACGACGACGAAGAAGAAGAAGAAGAAGAAGATGAGGCTGAGGAGGAGGAGGAGGACGGCCCTAAGTCCCACAAGAAAACCAAACGTCGTCGTCGCAAGATTCAATGGAAGCGCGTGCTAGAATGGGCCTTGTTCATCATCATATTAACAAGCTTGGTCTCCTGCATCACCATTCCTTCCATCAAAGCCAAGCACATGGGGGGTTTAGAGATTTGGAAATGGTGCTTGATGGGGATGGTCACCTTCAGCGGCCGCTTAGTCTCCGGCTGGATTGTCGCCGTCGCCGTCTTCATCATAGAACGAAACTTCATGCTTAGAGAAAAAGTCTTATACTTCATTTACGGTCTCAGAAAAAGCATCAGAAACTGCTTATGGCTTGGCCTCGTCTTATTCTCTTACTGGACCGTCGTCTTTGACAGCATTCAGAAAAAAAACCACAAGTTCCTCAACAAGGTGTTTCAGGCCCTCGTCGCCGTCCTCGTGGGAGCCATAATCTGGCTCGTAAAGATTGTGCTGGTGAAAATGCTAGCCTCGTCGTTCCACGTTGCGACCTACTTTGACAGAATGAAAGAGAGCGTGTTCCATCACTATATATTGGAATCACTCTCGGGGCCTCCATTGGAGGAGAACGAGGGATCACAGATTACTCTGATGGCGTCGAAGTCGATGCCGGCGAACTGGAAGGGGAGGAACAAGGAGAAGAAATTGTACAAGTTGAACAGGTTCGCGTCGAGGAAGATTGATATGGAGAAGCTGAAAGAACTGAGCATGGATAGCACGGCGTCGGTGTGGAGCGTAAAGAGGCTGGTCAACTACGTGAGGTCGTCGGGGCTGTCGACGATTTCCCGGACCGTCGATGATTTCGGGAACGCCGAGTCGGAGATCGGTAGTGAGTGGGAAGCTAGAAATTGTGCACAGAGGATTTTCAAGAACGTCGCTAAACCTGGTGCCAAGTATATTGAAGAGGAGGATCTCATGAGATTTTTGAAGAGAGTTGAAGTTCATACAATATTCCCACTCTTCGAAGGCGCCCTCGAAACTGGAAAGATCTCTAGGTCTTCATTTAGAAATTGGGTGATTCGAGCATATTATGAAAGGAAGGCTCTAGCACAATCACTGAACGACACGAAAACTGCAGTGCAACAGCTTCACAAGCTAGCAAGCTCAATAGTGATAGTGATAATCATTATAGTGTTCCTTTTGGTGATAGAGCTGGCTACTATCAAGGTAGTACTTTTCGTCATCACACAAATAGTTCTTCTTGGTGTTGCCTTCCAGGGCACCTGCAAGACTGTGTTGGAGGCCATCATCTTCGTCTTCATCATGCACCCCTTCGACATTGGAGATCGCTGTGTCATCGACGATGTCCACATGATTGTGGAAGAGATGAATATCTTGACAACTGTGTTTCTTCGATACGACAATGAGAAAATCTACTACCCCAACGCAGTTTTGCTCAACAAGCCAATAAGCAATTTCTATAGGAGCCCAGAGATGTGGGATTCTATTGACTTCGTTATTGATGTTTCGACACCTATGGAGATCATCATTTCACTCAAGAAAGCTATTCAAACGTACATAGAGAGCAAGCCAAAGTATTGGAATCCAAAGCACGCGGTGATAGCGAAGGAGATAGAGAATGTGCATAAGCTGAAGCTGTGTCTGTGTGTGCAACACACAATAAACCATCAGAACTATGGGGAGAGAAACAATCGGATCACGGAGCTTCTGATGGAGCTGAAGAAGATCTTTGAGGTTCATGGAGTTAAGTACAATCTTCTCCCTCAGGAGGTCCACATTACCAAGATGAACAGTACCCAAAATGGGAGGCCTGTCTTGTAA 2109 0.4689 MDNKPKSDQVVLFIDHLNASPPSTETHHNNINDNTSTNDKPKLTSRVKTLNRLSFSKPKSRIQENNHPLLYTNYAVPEEAQDPSWYSSTDDDEEEEEEEDEAEEEEEDGPKSHKKTKRRRRKIQWKRVLEWALFIIILTSLVSCITIPSIKAKHMGGLEIWKWCLMGMVTFSGRLVSGWIVAVAVFIIERNFMLREKVLYFIYGLRKSIRNCLWLGLVLFSYWTVVFDSIQKKNHKFLNKVFQALVAVLVGAIIWLVKIVLVKMLASSFHVATYFDRMKESVFHHYILESLSGPPLEENEGSQITLMASKSMPANWKGRNKEKKLYKLNRFASRKIDMEKLKELSMDSTASVWSVKRLVNYVRSSGLSTISRTVDDFGNAESEIGSEWEARNCAQRIFKNVAKPGAKYIEEEDLMRFLKRVEVHTIFPLFEGALETGKISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKLASSIVIVIIIIVFLLVIELATIKVVLFVITQIVLLGVAFQGTCKTVLEAIIFVFIMHPFDIGDRCVIDDVHMIVEEMNILTTVFLRYDNEKIYYPNAVLLNKPISNFYRSPEMWDSIDFVIDVSTPMEIIISLKKAIQTYIESKPKYWNPKHAVIAKEIENVHKLKLCLCVQHTINHQNYGERNNRITELLMELKKIFEVHGVKYNLLPQEVHITKMNSTQNGRPVL 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1350 702 MobiDBLite consensus disorder prediction 85 106 - -
Acco11g1350 702 Pfam Mechanosensitive ion channel 475 679 IPR006685 GO:0016020|GO:0055085
Acco11g1350 702 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 28 696 IPR016688 -
Acco11g1350 702 FunFam Predicted mechanosensitive ion channel 533 582 - -
Acco11g1350 702 MobiDBLite consensus disorder prediction 81 117 - -
Acco11g1350 702 PIRSF Memb_At2g17000 12 700 IPR016688 -
Acco11g1350 702 Gene3D - 533 582 IPR023408 -
Acco11g1350 702 Coils Coil 88 108 - -
Acco11g1350 702 MobiDBLite consensus disorder prediction 16 46 - -
Acco11g1350 702 MobiDBLite consensus disorder prediction 19 46 - -
Acco11g1350 702 SUPERFAMILY Sm-like ribonucleoproteins 524 582 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1350 Acco-ChrAcco11 27756253 27761090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1350 5 693 Mechanosensitive Ion Channel Family AT5G12080 42.621 0.0 556