Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1348 ATGGAGAGGTACAAGTTAATCAAGGAAGTTGGTGATGGAACTTTTGGGAATGTCTGGAGAGCTATTAATAAACAAACTGATGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTTTAAATCTGAGAGAGGTCAAGTCATTGATGAAAATGAACCACCCTAATATCGTGAAACTGAAGGAAGTTGTTCGAGATTGTGACATTCTTTACTTTGTTTTTGAGTACATGGAATACAACCTGTACCAACTTATGAAAGACAGGTCAAAGCTGTTTTCTGAAGATCAAGTTAGAAATTGGTGTTTTCAAATTTTCCAAAGTCTTGCTTACATGCACCAGCATGGATATTTTCACCGTGACCTGAAGCCAGAAAACTTTCTGGTCACCAAGGATGTTATTAAAGTTGCTGATTTTGGTCTAGCACGAGAGATCAATTCTCAACCACCATATACTGAATATGTCTCAACACGATGGTATCGAGCTCCTGAAGTGCTGCTTCAGTCTTATCTCTATGGTTCTGAAGTTGATATGTGGGCAATGGGTGCTATAATGGCTGAACTCTTCACTCTCCGCCCTCTTTTTCCTGGTGCCAGCGAAGCAGATGAGATGTACAAAATATGCAGTGTGATCGGCAGCCCCACCATGGAGACATGGGCTGGTGGGCTTAAACTTGCAAGGGATATCAACTACCAGTTTCCACAGCTTGCTGGTGTTCATCTTTCTGTTCTAATCCCCTCTGCAAGTGCTAATGCTATAGACCTTATGACAGCACTTTGCTCATGGGATCCCAGCAAAAGGCCGACAGCTGCTGAGGCCCTTCAACACCCATTCTTCCAGAGTTGTTTTTATATTCCTCCTTCCCTCCGCACCAAAGCAATAGCCAGAACTCCTCCATCTGCTGGGGTGCAGGGATCAGTGGATCGGCATGATGTTAAGAGATATTCAGGTGGTTTGTCTAATGCGAAGCTAGCCAATAACTATTCTTCCACAAAATTACAACCTCCCTTAGCTGCAGGTGTGCAGCGGAAACTGGATTTGACAAATGAGAAAGATGGAATTAAGTCTGATAAAGCCTCGAAGACCGTCAAACAACCAAAATATAGACCTCCTGGAAAGAACAGCCCAACATCAATGAACAAGGGAAGAACAGTACGTGCTGTTTCAGAAACAGCTGACAAGTTGGCTAATATGAGTCTTGGATCACGAAGACAATCTATGGGGCAAGCTCGGCCACCGCCTCCGATGAAAGCTGGAGTTTATTGGGGTCCTGAATCCAGAAACTTGCTGCCGAGGCCTGCTCAAGAGGTTTCTACTGGACGAACTTTTCCGAGGAAAGTCGCCGGATGA 1362 0.4391 MERYKLIKEVGDGTFGNVWRAINKQTDEVVAIKKMKKKYYSWEECLNLREVKSLMKMNHPNIVKLKEVVRDCDILYFVFEYMEYNLYQLMKDRSKLFSEDQVRNWCFQIFQSLAYMHQHGYFHRDLKPENFLVTKDVIKVADFGLAREINSQPPYTEYVSTRWYRAPEVLLQSYLYGSEVDMWAMGAIMAELFTLRPLFPGASEADEMYKICSVIGSPTMETWAGGLKLARDINYQFPQLAGVHLSVLIPSASANAIDLMTALCSWDPSKRPTAAEALQHPFFQSCFYIPPSLRTKAIARTPPSAGVQGSVDRHDVKRYSGGLSNAKLANNYSSTKLQPPLAAGVQRKLDLTNEKDGIKSDKASKTVKQPKYRPPGKNSPTSMNKGRTVRAVSETADKLANMSLGSRRQSMGQARPPPPMKAGVYWGPESRNLLPRPAQEVSTGRTFPRKVAG 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1348 453 FunFam Serine/threonine-protein kinase MHK 1 83 - -
Acco11g1348 453 MobiDBLite consensus disorder prediction 352 368 - -
Acco11g1348 453 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Acco11g1348 453 MobiDBLite consensus disorder prediction 352 390 - -
Acco11g1348 453 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Acco11g1348 453 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1348 453 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1348 453 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 348 - -
Acco11g1348 453 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1348 453 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Acco11g1348 453 MobiDBLite consensus disorder prediction 375 389 - -
Acco11g1348 453 CDD STKc_MAK_like 4 283 - -
Acco11g1348 453 MobiDBLite consensus disorder prediction 403 453 - -
Acco11g1348 453 Gene3D Transferase(Phosphotransferase) domain 1 84 289 - -
Acco11g1348 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Acco11g1348 453 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1348 Acco-ChrAcco11 27735412 27738874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1348 1 290 Core Cell Cycle Gene Families AT3G48750 38.176 1.39e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Acco11g1348 Pkinase 5.9e-74 CL0016