Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1345 ATGTCAATGGCGGCTTCCAGCTCTCTTCTAAAGTTGGATCAGATTCAAGGTAAAGGAAGAGGTTTAATCGCAGCTCAGAATCTGAAAGCCGGCCAAGTCGTCCTCACTGAATCTCCCATCATTCTCTATTCCACTTTCCCTCTCTTCTCTGATTCATCTTCTTCTTACTGTGACCACTGCTTCAGATCAATCTCATCGACTTCATCATTTTCGTGTCCCTCTTGTTCGCGACACCGTTTCTGTAGCCAAAAATGCCTCTCTCTTGCTCTCAAATCCTCTCACTCTTCATGGGTATGTCAAGCAATGTCTCACCTTCGAGACTCTGGTTCAGAGCTTCTTCGTCAATCTTACGAACTTCAAGTCCAGGCTCGTTTCGTTGTGGCTGTTTATAACCTTTACCTTATGTCCCCTTCCAGTATTCAGATCTTGCTTTCTCTTATGGGAACCCCAGATGAAGCCATTGTTAAAGCTTCGAGCTTTCTTCACTCTCTTATTTCTTCTGTGTGCCCACCTCAGGATCATCAGCTCTCTGCAGAACTCACTGCTCAACTTATGGCTAAAGATAGGCTTAATTCTTTCTGTTTAATGGAACCTTATTCCCCAGATGGTCCTCAGAGATCCATCAAGGCATATGCTATATACCCAAAAGCCACTTTCTTTAACCATGATTGCCTTCCCAATGCCTGCAGATTTGATTACGTCGAGGATGGTGTTCCTGGAGATGAACACAACACTGACATCGTGTTTAGGATGATTGAGGATGTTGCCGAGGGGAGAGAAGTGTGCATAAGCTATTTCAGAATCAATAGGGATTATTCGACAAGGAAGAGGATCTTGATGGAAGATTATGGGTTTGTTTGTGGGTGTGAAAGGTGCAAGAGTGAAGCCAATTGGGTTGTTGATGGTGATGGTGATCAAAGTAGTAGTGATTTTCCTCATGAGTGGTTCTTGAAGAAGTATGTGTGTGATAAGAAGAACTGTTCTGGTACACTCGCTCCTCTGCCTCCGAAGGATGATGATGAGCCATCTAATGTTTTGGAATGTAATTTCTGTGGCAATTTAAAAGTTGAGGCTGCTTGA 1080 0.4361 MSMAASSSLLKLDQIQGKGRGLIAAQNLKAGQVVLTESPIILYSTFPLFSDSSSSYCDHCFRSISSTSSFSCPSCSRHRFCSQKCLSLALKSSHSSWVCQAMSHLRDSGSELLRQSYELQVQARFVVAVYNLYLMSPSSIQILLSLMGTPDEAIVKASSFLHSLISSVCPPQDHQLSAELTAQLMAKDRLNSFCLMEPYSPDGPQRSIKAYAIYPKATFFNHDCLPNACRFDYVEDGVPGDEHNTDIVFRMIEDVAEGREVCISYFRINRDYSTRKRILMEDYGFVCGCERCKSEANWVVDGDGDQSSSDFPHEWFLKKYVCDKKNCSGTLAPLPPKDDDEPSNVLECNFCGNLKVEAA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1345 359 SUPERFAMILY SET domain 13 293 IPR046341 -
Acco11g1345 359 CDD SET_SMYD 190 292 - -
Acco11g1345 359 Gene3D - 56 108 - -
Acco11g1345 359 ProSiteProfiles SET domain profile. 8 266 IPR001214 GO:0005515
Acco11g1345 359 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 302 357 IPR044238 -
Acco11g1345 359 SMART set_7 8 272 IPR001214 GO:0005515
Acco11g1345 359 Gene3D - 114 192 - -
Acco11g1345 359 Pfam SET domain 19 265 IPR001214 GO:0005515
Acco11g1345 359 Gene3D SET domain 21 293 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1345 Acco-ChrAcco11 27710389 27711468 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco11g1345 SET 1e-11 No_clan