Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1342 ATGAGCATTCCGCCAGCGGCCATGTGGACAGGATTCCAGCCTCCGCCGTTCACGGCGGCGCAGTGGACTGAGCTCGAACACCAGGCCCTCATCTTCAAGTATCTCAAAGCTGGTTTAACCGTTCCGCCTGACCTCCTCGCTCCGATTCACCGGAGTTTCCAACTGATGATGCCGGTTCCACATTCAGCTCTGGGTTACAGCTCCTATTTTGGGAAGAAGATAGACCCAGAACCAGGTCGGTGCCGGAGAACCGACGGCAAGAAATGGAGGTGCTCGAGAGATGCACACCCAGATTCTAAGTACTGTGAGCGACACATGATTCGCCGTCGTCATCGTTCAAGAAAGCCTGTGGAAACATCACAAGCTGCTCATCCTCCTTCTCCGCCTCCGCCTCCAGCTGCTCAGTCACCGGAGGTTAGTGGTGGTGGTGGAAACTCTTTTCCCAGCCTACCTCTTCACACAAACGGCACTCGTGAGGGCTTAAACCTCGGAGACAGCAACGTATCACAACAGATTCAGATTGAGCCTCTTCCAATTGAGTTGAATAAGAAAGAGTACAGTTTTAGACCGCAATCTGAGGTAGATGAGCATGACTTCTTCCAGCAGAAAGACGTCGGAAATGTGAGGTACCTTGGATTTGACTCTTCCTCAGATTCTAGCATGTGGTCTCAACTGTCTCACATTTCACCGAACGCTGTCGCTGAGTCGAGCAACAGTTCTGTAATGGCAAGCAACTGCTATCAACTGCAAGGAATGCCGGTGGCTGATGCTGAGCAGCCAGCACCACTGTCAAACAACATCACAGATGCTGTGACATCATCCAGGCAACTCGGCTTCTGTGGTCAGTTAGGTTCAACTGGTTGCTTGAAACAACAGGACTATCATCAATCTCCTCCTCAGACTCAGCTCAATGGTTGGCCATGGAAGTATAGACCCAATAAGGATGCTGCTGCTAATGGCAACCCTGATGTGAATGTTGATTCCTGTGGATCTCTGTAA 999 0.5095 MSIPPAAMWTGFQPPPFTAAQWTELEHQALIFKYLKAGLTVPPDLLAPIHRSFQLMMPVPHSALGYSSYFGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRHRSRKPVETSQAAHPPSPPPPPAAQSPEVSGGGGNSFPSLPLHTNGTREGLNLGDSNVSQQIQIEPLPIELNKKEYSFRPQSEVDEHDFFQQKDVGNVRYLGFDSSSDSSMWSQLSHISPNAVAESSNSSVMASNCYQLQGMPVADAEQPAPLSNNITDAVTSSRQLGFCGQLGSTGCLKQQDYHQSPPQTQLNGWPWKYRPNKDAAANGNPDVNVDSCGSL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1342 332 MobiDBLite consensus disorder prediction 122 136 - -
Acco11g1342 332 Pfam QLQ 16 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco11g1342 332 ProSiteProfiles WRC domain profile. 75 119 IPR014977 -
Acco11g1342 332 PANTHER GROWTH-REGULATING FACTOR 5 15 226 IPR031137 GO:0005634|GO:0006351|GO:0032502
Acco11g1342 332 MobiDBLite consensus disorder prediction 75 164 - -
Acco11g1342 332 SMART QLQ_2 15 51 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco11g1342 332 MobiDBLite consensus disorder prediction 75 104 - -
Acco11g1342 332 ProSiteProfiles QLQ domain profile. 16 51 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco11g1342 332 MobiDBLite consensus disorder prediction 139 164 - -
Acco11g1342 332 Pfam WRC 76 118 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1342 Acco-ChrAcco11 27683995 27685887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1342 15 121 GRF Transcription Factor Family AT3G13960 59.292 1.30e-40 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Acco11g1342 WRC 7.6e-20 No_clan