Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1327 ATGGCTGGCCTGCAAAACTCATTATTGATCTATCATCTTCAATTTCTCATGCTATTACTCTGTAAAAATAATATCATCAGTGTGATTGCGGAAGAAACCAACACTCTGAATCAATCAGACACACTCAACTTCACCAGTTTCTTGGTTTCCAACAACAAGAACTTCACCTTAGGATTCATCAAACCTTTTACTTATAACAACAACACTTACTTAGCCATCTGGAATTCCAAATACAGCTCATCTTCTTCTCCAGTTTGGATCGCCAACAGAGACACCCCAATCACTAATGGTTCTTCTGCAACTCTCTTCATCCACCACACCGGAAAGTTTGTCGTCAATCTAACTCACGGCAACCCAATTCAACTATGCCCAGGCCAAGAAACCACCACCACCAATAACAACAACACTGTTAACTACACTAACACAAAGGCCGTTTTGTTGGATAATGGAAACCTCGTACTGACAGAGGTGAACTCCAATGGATCTGTCGGTCGGACCTTGTGGCAGAGCTTTGATTGTCCCACAGACACTCTTTTACCAGGCATGATACTTGGGATCAATCACAGAACAGGAAGGAACTGGTCTCTAACCTCATGGCTAGCTTCTAATGATCCATCTCCAGGAGCTTTCACACTCGCATGGGACCCACATGGATTAGAGCTGGTTCTTCGACGCAGAGGGGTTATTTTTTGGACTAGTGGAACGTTAAAAAATGATGATCTTGAAGGTGGATTGACCTTTGGGAACACAGGACCAACCTTGTCTCTTATATGGCCTTACAAGTTGATGTATACTAAAACTCCAGATGAAGAGTTCTTCAGTTTTACGTGGAAACCCGATCCTAAGGATCCAACGGGCTTAAAATGGAGCATAGATTACGATGGTACTTTCTGGTTTGGGAATACTGGAATTCCATTACAGGATTATTGTTTTGGGTACAAGACAAAGGAAGATGAGGGATGCGCAGAATGGGAACAACCTCAGTGTAGGATTTATAATACAACGTTTCAGTTGTTGTCTGGTTACTTTGTGAAGAAAAGTGATGGGAACTATTTTGATGGTGAATATAGTGCAGATAGTAAAGGGATTGGTCCTGCTGATTGTAGAGTTAATTGCTGGAATGATTGTGATTGCCAGGCATATCAGAAGATAGGCACTTTAAGTTGTGTTGAATATCACGAAGATCAAGAGTTTCGACCAGATCCTTCTGGGAATTCACAACAATTTTATGTTATTCAAAAACCACAAACTGGTTTAACTGTTGCGGAAAGGAACAAGGAGCAACGGATTGCAATTTCAGTTCCCATTTCAATATTATTGTTGTTAGCATCTGTTGTTATAATCTTCTATTGGAGAAGGAAAAGGAAAGAAGGGAGAAAAGAGGACCATCTACATCAAGTGATGGTAGAAACCAATGATTTGCACAATTTAGATGAGCTTGGATATGATAATGGTTTTTCTCAACATTTGAAAGTTTTCAGCTTTTTGTCTATCGTTGAGGCTACAAATAACTTTTCAGCAGAAAATAAGCTTGGACAAGGTGGTTTTGGCCCAGTTTATAAGGGAAAACTGCCAGAAGGAGAAGAAATTGCAGTAAAAAAGCTATCAAGAAGTTCAGGACAAGGAATTTTCAAACGGGATGAACTCATTGCCAACACTAATAGGATTGTTGGGACATATGGTTACATGTCTCCTGAATATGCAATGGAAGGGGTGTTCTCCATAAAATCAGATATATTTAGTTTCGGAGTCATAATACTTGAAATTTTAAGTAGCAAGAGAAACAACAGCTTTTATGATGTTAATAAACCGATGAATTTAGTAAAACATGCTTGGGATTTGTGGCAAAATGGAGTCGGCTTAGAACTAATGGATCCAACATTAAGTGATTCATGTTCCACTCAACAATTTCTTAGATTTATTCATATAGGTTTGTTGTGCGTGGAAGAATGTCCAGCAGATAGACCAACTACTTCAGAAGTCATTTCTATGATCACAAATGAAAGTACCATTTTGCCTATAGTGAAGAAACCTGCATTTGCAAATTTAGGCAATGTCACCGATGTAGATTCTCAGAAGGAAGACTTGGAATACCATTCCATCAACAATGTGTCAGTATCCACTATGAATGGAAGATAG 2139 0.3922 MAGLQNSLLIYHLQFLMLLLCKNNIISVIAEETNTLNQSDTLNFTSFLVSNNKNFTLGFIKPFTYNNNTYLAIWNSKYSSSSSPVWIANRDTPITNGSSATLFIHHTGKFVVNLTHGNPIQLCPGQETTTTNNNNTVNYTNTKAVLLDNGNLVLTEVNSNGSVGRTLWQSFDCPTDTLLPGMILGINHRTGRNWSLTSWLASNDPSPGAFTLAWDPHGLELVLRRRGVIFWTSGTLKNDDLEGGLTFGNTGPTLSLIWPYKLMYTKTPDEEFFSFTWKPDPKDPTGLKWSIDYDGTFWFGNTGIPLQDYCFGYKTKEDEGCAEWEQPQCRIYNTTFQLLSGYFVKKSDGNYFDGEYSADSKGIGPADCRVNCWNDCDCQAYQKIGTLSCVEYHEDQEFRPDPSGNSQQFYVIQKPQTGLTVAERNKEQRIAISVPISILLLLASVVIIFYWRRKRKEGRKEDHLHQVMVETNDLHNLDELGYDNGFSQHLKVFSFLSIVEATNNFSAENKLGQGGFGPVYKGKLPEGEEIAVKKLSRSSGQGIFKRDELIANTNRIVGTYGYMSPEYAMEGVFSIKSDIFSFGVIILEILSSKRNNSFYDVNKPMNLVKHAWDLWQNGVGLELMDPTLSDSCSTQQFLRFIHIGLLCVEECPADRPTTSEVISMITNESTILPIVKKPAFANLGNVTDVDSQKEDLEYHSINNVSVSTMNGR 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1327 712 ProSiteProfiles Protein kinase domain profile. 378 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1327 712 Gene3D - 26 172 IPR036426 -
Acco11g1327 712 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 205 IPR036426 -
Acco11g1327 712 Gene3D Phosphorylase Kinase; domain 1 448 546 - -
Acco11g1327 712 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 544 670 - -
Acco11g1327 712 Pfam Protein tyrosine and serine/threonine kinase 558 601 IPR001245 GO:0004672|GO:0006468
Acco11g1327 712 SUPERFAMILY Protein kinase-like (PK-like) 490 678 IPR011009 -
Acco11g1327 712 ProSiteProfiles Bulb-type lectin domain profile. 33 167 IPR001480 -
Acco11g1327 712 PIRSF SRK 542 712 IPR024171 GO:0004674
Acco11g1327 712 PIRSF SRK 5 297 IPR024171 GO:0004674
Acco11g1327 712 PIRSF SRK 311 545 IPR024171 GO:0004674
Acco11g1327 712 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 21 656 - -
Acco11g1327 712 Pfam D-mannose binding lectin 84 199 IPR001480 -
Acco11g1327 712 Gene3D Transferase(Phosphotransferase) domain 1 547 670 - -
Acco11g1327 712 SMART blect_4 33 174 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1327 Acco-ChrAcco11 27512994 27516192 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1327 543 680 Receptor kinase-like Gene Family AT4G23150 52.899 1.74e-44 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco11g1327 PK_Tyr_Ser-Thr 1.8e-06 CL0016