Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1325 ATGGCTGGCCTGCAAAACTCATCATTGATCTATCATCTTCACTTTCTCATGCTATTACTCTGTAGAAATAATATCATCAGTGTGATTGCAGAAGAAACCAATACTCTGAATCAATCAGACACACTCAACTTCACCAGTTTCTTGGTTTCCAGCAACAAGAACTTCACCTTAGGATTCGTCAAACCTTTCGTCGACAACAACAACAACGATACATACTTAGCCATTTGGAATTCCAAGTATAAGTCACCTTCATCTCCAGTTTGGATCGCCAACAGAGACACCCCAATCACTGTTGATTCTTCTGCAACTCTCTTCATCCACCATACCGGAGAGTTCGTCATCAATCGAACTCATGGCCACCCAATTCAACTATGCCCCGGCGGAGAAACCAACAACAACAACACCATTAACTACACTAACATGAAGGCTGTTTTGTTGGATAATGGAAATCTCGTACTGACAGAAGTGAACTCCAATGGATCTGTCGGTCGGACCTTGTGGCAGAGCTTTGATTGTCCCACAGACACTCTTTTACCAGGCATGATACTTGGGATCAATCACAGAACAGGAAGGAACTGGTCTCTAACCTCATGGCTAGCTTCTAATGATCCATCTCCAGGAGCTTTCACACTCGCATGGGACCCACATGGATTAGAGCTGGTTCTTCGACGCAGAGGGGTTATTTTTTGGACTAGTGGAACGTTAAAAAATGATGATCTTGAAGGTGGATTGACCTTTGGGAACACAGGATCAGCCCGGTCTCTTTTCTCAGGGCATTACAAGTTGATGTATACTAAAACTTCAGATGAGGAGTTCCTCAGTTTTTCGTTGAAACCCGATCCTATGGATTCTACGGGCAGCAGAAACTGGAGGATAGGTTACGATGGTACTTTCTGGTTTGGGAATATTGGAACTCCATTACAGGATTTATGTCTTGGGTACAAGACAGAGCAAGAAGAGGGATGCGCAGAATGGGAACAACCTCAGTGTAGGATTTCTAATACAACGTTTCAGTTGTTGTCTGGTTCCTTTGTGAATAAAAGTGACGGGAACTATTTAAATAATGGTGATATTAGTGAAGGGATTGGTCCTGCTGATTGTAGGGTTAATTGCTGGAATGATTGTGATTGCCAGGCATATCAGAAGATAGACATTTTAGGTTGTGTTGAATATCACCAAGATGCAGAGTTTCGACCAGATCCTTCAGGGAGTTCACTACAATTTTATGTTATCCAAAAACCACAAACTGAAAGGAACAAGAAGAAATGGATTGCAATTTCAGTTCCCATTGCAATATTATTGTTGTCAGCATCTGTTGCCGTTATAATCTTTTATTGGAGAAGGAAAAGGAAAGAAGGGAGAAAAGAGGATCATCTACATCAACTGATGGCAGAAATTAATGATTTGCACAATTTAGATGAGCTTGGATATGATAATGGTTTTTCTCAACATTTGAAAGTTTTCAGCTTTTTGTCTATCGTTGAGGCTACAAATAACTTTTCAGCCGAAAATAAGCTTGGACAAGGTGGTTTTGGCCCAGTTTATAAGGGAAAACTGCCAGAAGGAGAAGAAATTGCAGTAAAAAAGCTATCTAGAAGTTCAGGGCAAGGGTTAGTGGAGTTCAAGAATGAGTTAATACTCATAGCAAAGCTACAACACATGAATCTAGTTCGTTTGCTTGGATGTTGCATACAAGCTGATGAGAAGTTGTTGGTTTATGAATACATGCCTAACAAAAGTTTGGACTCCTTTCTCTTTGTGAGACTTTTCTATGGTTGTAATTCTAAAGATGCATCGAAGAGGGGTTTGTTGAATTGGGGGACAAGAGTGATGATTATTGAAGGGATTTCACAAGGACTTCTTTACCTTCATCAGCATTCAAGATTAAGAATCATACACAGGGATTTGAAAGCTTGGGATTTGTGGCAAAATGGAGTTGGCTTAGAACTAATGGATCCAACATTAAGTGATTCATGTTCCACTCAACAATTTCTTAGATATATTCATATAGGTTTGTTGTGCGTGGAAGAATGTCCAGCAGATAGACCAACTACTTCAGAAGTCATTTCTATGATCACAAATGAAAGTACCATTTTGCCTGTAGTGAAGAAACCTGCATTTGCAAATTTAGACAATGCCACCGATGTAGATTCTCAGAAGGAAGACTTGGAATGCCATTCCATCAACAATGTGTCAGTATCCACTATGAATGGAAGATAG 2220 0.4018 MAGLQNSSLIYHLHFLMLLLCRNNIISVIAEETNTLNQSDTLNFTSFLVSSNKNFTLGFVKPFVDNNNNDTYLAIWNSKYKSPSSPVWIANRDTPITVDSSATLFIHHTGEFVINRTHGHPIQLCPGGETNNNNTINYTNMKAVLLDNGNLVLTEVNSNGSVGRTLWQSFDCPTDTLLPGMILGINHRTGRNWSLTSWLASNDPSPGAFTLAWDPHGLELVLRRRGVIFWTSGTLKNDDLEGGLTFGNTGSARSLFSGHYKLMYTKTSDEEFLSFSLKPDPMDSTGSRNWRIGYDGTFWFGNIGTPLQDLCLGYKTEQEEGCAEWEQPQCRISNTTFQLLSGSFVNKSDGNYLNNGDISEGIGPADCRVNCWNDCDCQAYQKIDILGCVEYHQDAEFRPDPSGSSLQFYVIQKPQTERNKKKWIAISVPIAILLLSASVAVIIFYWRRKRKEGRKEDHLHQLMAEINDLHNLDELGYDNGFSQHLKVFSFLSIVEATNNFSAENKLGQGGFGPVYKGKLPEGEEIAVKKLSRSSGQGLVEFKNELILIAKLQHMNLVRLLGCCIQADEKLLVYEYMPNKSLDSFLFVRLFYGCNSKDASKRGLLNWGTRVMIIEGISQGLLYLHQHSRLRIIHRDLKAWDLWQNGVGLELMDPTLSDSCSTQQFLRYIHIGLLCVEECPADRPTTSEVISMITNESTILPVVKKPAFANLDNATDVDSQKEDLECHSINNVSVSTMNGR 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1325 739 ProSiteProfiles Protein kinase domain profile. 500 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1325 739 PIRSF SRK 5 295 IPR024171 GO:0004674
Acco11g1325 739 PIRSF SRK 637 739 IPR024171 GO:0004674
Acco11g1325 739 PIRSF SRK 312 638 IPR024171 GO:0004674
Acco11g1325 739 Gene3D Phosphorylase Kinase; domain 1 464 575 - -
Acco11g1325 739 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 466 575 - -
Acco11g1325 739 Pfam D-mannose binding lectin 86 198 IPR001480 -
Acco11g1325 739 Gene3D Transferase(Phosphotransferase) domain 1 639 706 - -
Acco11g1325 739 SMART blect_4 33 173 IPR001480 -
Acco11g1325 739 CDD B_lectin 46 173 IPR001480 -
Acco11g1325 739 Gene3D Transferase(Phosphotransferase) domain 1 576 638 - -
Acco11g1325 739 Pfam Protein tyrosine and serine/threonine kinase 502 639 IPR001245 GO:0004672|GO:0006468
Acco11g1325 739 ProSiteProfiles Bulb-type lectin domain profile. 33 166 IPR001480 -
Acco11g1325 739 Gene3D - 26 171 IPR036426 -
Acco11g1325 739 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 638 714 - -
Acco11g1325 739 Pfam PAN-like domain 360 394 IPR003609 -
Acco11g1325 739 SUPERFAMILY Protein kinase-like (PK-like) 479 638 IPR011009 -
Acco11g1325 739 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 204 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1325 Acco-ChrAcco11 27496394 27499565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1325 639 739 Receptor kinase-like Gene Family AT4G21410 38.835 2.80e-11 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco11g1325 PK_Tyr_Ser-Thr 6e-21 CL0016