Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1324 ATGGCTGGCCTACAAAACTCATCATTGATCTATCATCTTCACTTTCTCATGCTATTACTCTGTAAAAATAATATCATCAGTGTGATTGCAGAAGAAACCAACACTCTGAATCAATCAGACACACTCAACATCACCAGTTTCTTGGTTTCCAACAACAAGAACTTCACCTTAGGATTCGTCAAACCTTTCGTCGACAACAACAACAACAACACATACTTAGCCATTTGGAATTCCAAGTATGAGTCACCTTCATCTCCAGTTTGGATAGCCAACAGAGACAACCCAATCACTAATGCTTCTTTTGCAACTCTCTTTATCCACCACACCGGAAAGTTCGTCATCAATCGAACTCATGATGGCCACCCAATTCAACTATGCCCCGGCGGAGAAACCAACAACAACAACACAAAGGCTGTTTTGTTGGACAATGGGAATCTCGTACTGACAGAAGTAAATTCCAATGGATCTGTGGGTCGGACCTTGTGGCAGAGCTTTGATTGTCCCACAGACACACTTTTGCCTGGCATGAAACTGGGCATCAATCACAGAACAGGAAAGAACTGGACTCTCACATCATGGTTGGCTCCGGATGACCCATCTCAAGGAGCTTTTACGCTCGAATGGAACCCCAATGGTCAAGAGCTGGTTGTTCGACGAAGAGGTATGAATTTTTGGAACAGTGGGATAATGAAAAATGTTAGTGATGACAAAGGTCGAATGACCTTCGAAAACTTAGAGGTGATGGAATTTACATTAGAGTATAAGTATTACCGGATGAGGTCTAACAAATCTTTAGATGAAGAGGTTTTTAGTTATTCGTTGAAATATGACCCTATGGATCCTTCCACTTATAAAAGCATAAGTATGAGGATAGATTACACGGGTGCCTTTTCCTTTGCTCAGAATGGGATGGCAATTTCATTAGAGAATTTGTGTTATGGGTATAGTACAGAGAGTGGATGTGCAAAATGGAGCCAACCAAAATGTAGGAGTGACGAGGGTACGAGGTTTGTATTGCGGTCTGGCTCCTTTACAAATAGGCCTAACTCTGTTGGTGGTGGTGATTATGATGATAAAGGAAAGATTGGTCCAGCTGATTGTAGAGTTAGTTGTTGGAATGACTGTAATTGCCAGGCATATTTGAAAACTGATGCTGTTGGTTGTTTCGCGATACGTAAAGATGAAGAGTTCTTACCAGATCCATCCGGACAGGCTATAAAATATTATGTTATCCAAAGGCCACAAAATGAAAGGAACACCAAGAAATGGATTGCAATTTCAGTTTCAATCAGTGGTTTGTTGTTAGTTTCTGTCACTGTCTTTATCTTCTATTGGAGATGGAGAACAAAAGCTACAAATAACTTCTCTGTGCAAAATAAGCTTGGACAGGGTGGTTTTGGTCCTGTATATAAGGGAAAACTAGCAGAAGGAAAAGAAATTGCAGTGAAGAGGCTATCAAGTAGTTCAGGACAAGGATTAGCAGATGGATATATGTCTCCTGAGTATGCAATGGATGGAATATTCTCTGGGAAATCAGACATTTTCAGTTTTGGTGTCATAATTCTTGAAATTTTAAGTGGCAGGAGGAATAACAGTTTTTACAATATTGAAAAGCGTCTGAATCTAATTGGACATGCTTGGGATTTGTGGGAAAAAGGAGCTGGTTTAGAGTTAATGGATCCAACACTAAGTAATTCATGTTTCAACCAACAATTTCTCAGACTTGTTCAAATTGGTCTTTTATGTGTGGAAGAATCTCCAATAGACAGACCAACTATTTCAGAAGTCATTTCTATGATCACAAATGAAAGTACAATTTTACCCATGGTGAAGAAACCTGCATTTACAAATTTAGACAGCAACATCCATGCAAATCCTCAAAGAAATGACTTGCAAAACAATTCCATGAACAATGTTTCGATCTCTACTGTGAAGGGACGATAA 1944 0.3956 MAGLQNSSLIYHLHFLMLLLCKNNIISVIAEETNTLNQSDTLNITSFLVSNNKNFTLGFVKPFVDNNNNNTYLAIWNSKYESPSSPVWIANRDNPITNASFATLFIHHTGKFVINRTHDGHPIQLCPGGETNNNNTKAVLLDNGNLVLTEVNSNGSVGRTLWQSFDCPTDTLLPGMKLGINHRTGKNWTLTSWLAPDDPSQGAFTLEWNPNGQELVVRRRGMNFWNSGIMKNVSDDKGRMTFENLEVMEFTLEYKYYRMRSNKSLDEEVFSYSLKYDPMDPSTYKSISMRIDYTGAFSFAQNGMAISLENLCYGYSTESGCAKWSQPKCRSDEGTRFVLRSGSFTNRPNSVGGGDYDDKGKIGPADCRVSCWNDCNCQAYLKTDAVGCFAIRKDEEFLPDPSGQAIKYYVIQRPQNERNTKKWIAISVSISGLLLVSVTVFIFYWRWRTKATNNFSVQNKLGQGGFGPVYKGKLAEGKEIAVKRLSSSSGQGLADGYMSPEYAMDGIFSGKSDIFSFGVIILEILSGRRNNSFYNIEKRLNLIGHAWDLWEKGAGLELMDPTLSNSCFNQQFLRLVQIGLLCVEESPIDRPTISEVISMITNESTILPMVKKPAFTNLDSNIHANPQRNDLQNNSMNNVSISTVKGR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1324 647 Pfam Protein tyrosine and serine/threonine kinase 495 598 IPR001245 GO:0004672|GO:0006468
Acco11g1324 647 Gene3D Phosphorylase Kinase; domain 1 439 496 - -
Acco11g1324 647 ProSiteProfiles Bulb-type lectin domain profile. 33 161 IPR001480 -
Acco11g1324 647 MobiDBLite consensus disorder prediction 625 647 - -
Acco11g1324 647 SUPERFAMILY Protein kinase-like (PK-like) 442 626 IPR011009 -
Acco11g1324 647 Pfam D-mannose binding lectin 86 193 IPR001480 -
Acco11g1324 647 SMART blect_4 33 168 IPR001480 -
Acco11g1324 647 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 199 IPR036426 -
Acco11g1324 647 CDD B_lectin 39 168 IPR001480 -
Acco11g1324 647 Gene3D Transferase(Phosphotransferase) domain 1 497 602 - -
Acco11g1324 647 Gene3D - 26 166 IPR036426 -
Acco11g1324 647 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 21 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1324 Acco-ChrAcco11 27487739 27491216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1324 496 615 Receptor kinase-like Gene Family AT4G23150 50.000 3.00e-36 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco11g1324 PK_Tyr_Ser-Thr 4e-06 CL0016