Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1323 ATGGTGCGTCGTGCTTCCCTGAAGGACTTGGATGATTCAACTGATCGTTGGGCTGTGGTAGTTAGAGTCTTCCGGAAATGGAATGTCTACCAAAAATCTGCCCTAGCTGAATTGTTTTGTGTTTCCATGGTCCTAATTGATGAGGAGGGTAACACAATTCAAGCAAGTGTGCTAAACAAGAACCTCCATGATAAATATCGCCTCTCTATTATTCAAGGCCAAATTTACAAGTTTGCCAACTTTGAGGTCACTCCAAATGTTAGTCAGTACAGAGCAACCAGCCACCCATTCAAGATGACATTCACAACCATGACGTTCTCTGCAGAAGATAACGCTACAATTCCAAGTTATGCCTACTCATTTCTTCCTATCTCTGAAATCATGAAAATTGATTTTCGTCATCCTGTGTATAATCTTTTTGATGTGCTGGCTTTTGTGAAGGATGTTGGCACATTGGATGAGTTCTGCCGAGGCAATGAAACGAAAAATAGGCTATGTTTGTTGCTGGCTGACTCTGAAAACAATGAAGTGGAGTGCACGTTGTTTGATGACTGTGCTTTAGATGCCTATATGGCTTACCTGCAGAATGCTGAAAGCCCTGTTGTGGTTTTATTAAACTTAGCAAGAGTTGGATTTTCAGAGGATGGCACACCACAAGTGTGTAGTTCATTCAATGCTACTAGGGCATTTTTTAACCCTTCTATCATAGAAGTAAAAAATTTCATACAAATGTATTTATTGTTTACCAAAATTACTATCTCTCAAATACCTGAGCAAGCAATTGGAGATTCGTTTGTAATCAACTGTCACATTCTTAAGCTTGAAACAAGACACGGCTGGTGTTATGATGGATGTTCAAAGTGTGGATCAAAGGCAACTTCTCCTTCATCAATTTGTCCCCTGTGCAAGAAAAAACCAGATTCAATTGAACCAAAGATGAAGATTCATTATCTTGTCAGAGACGAAACTGGCTCAGCTTCTGTCATTTTTTGGGATAAACTTGCTGTTCAGTTGGTTAAGAAGACAGCATCTGAACTTATTCATTTACTAAAGGAGGACGATAACTTCCTAGATGCGTTAGATCTTCCCGTTGGAAAGAAGGTGCTGCTGAAAATGAAGCTGAATGACTACAACAAGCAGCATCCTACTTCTAGCATTAGTGTTAGCCAATACACCATATGCGAAGATCTTTTGAACCAATTCAATGAAGCAAATACAGAGGGAATTGTGGAGACTGTTGATGCTCAAAATGGTGCTGAGAATATATTTGTCAATCCTATGGCTGAAGGTGTTACTCCACTTGCAACACCTCTTGAAGATAGCACCATAAATGATCTTTCTCAACATGTCTCCCCTGCTCCTGTGAAGGGTAAAATAAGGATAACTAACAAGAGGAATGTTGTTAAGGATGACTTAACAACTAATTCTCATATGCCTTCTGCTGGTCCTGTAGAGGAAAGAAGTTCAAAAGTGATAAAGCAAGAGAAGTAG 1491 0.3957 MVRRASLKDLDDSTDRWAVVVRVFRKWNVYQKSALAELFCVSMVLIDEEGNTIQASVLNKNLHDKYRLSIIQGQIYKFANFEVTPNVSQYRATSHPFKMTFTTMTFSAEDNATIPSYAYSFLPISEIMKIDFRHPVYNLFDVLAFVKDVGTLDEFCRGNETKNRLCLLLADSENNEVECTLFDDCALDAYMAYLQNAESPVVVLLNLARVGFSEDGTPQVCSSFNATRAFFNPSIIEVKNFIQMYLLFTKITISQIPEQAIGDSFVINCHILKLETRHGWCYDGCSKCGSKATSPSSICPLCKKKPDSIEPKMKIHYLVRDETGSASVIFWDKLAVQLVKKTASELIHLLKEDDNFLDALDLPVGKKVLLKMKLNDYNKQHPTSSISVSQYTICEDLLNQFNEANTEGIVETVDAQNGAENIFVNPMAEGVTPLATPLEDSTINDLSQHVSPAPVKGKIRITNKRNVVKDDLTTNSHMPSAGPVEERSSKVIKQEK 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1323 496 SUPERFAMILY Nucleic acid-binding proteins 251 381 IPR012340 -
Acco11g1323 496 SUPERFAMILY Nucleic acid-binding proteins 119 245 IPR012340 -
Acco11g1323 496 Gene3D - 249 402 IPR012340 -
Acco11g1323 496 PANTHER OS03G0429900 PROTEIN 6 431 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Acco11g1323 496 Gene3D - 4 107 IPR012340 -
Acco11g1323 496 SUPERFAMILY Nucleic acid-binding proteins 6 105 IPR012340 -
Acco11g1323 496 CDD RPA1_DBD_A_like 19 105 - -
Acco11g1323 496 Pfam Replication factor-A C terminal domain 265 377 IPR013955 -
Acco11g1323 496 Pfam Domain of unknown function DUF223 43 127 IPR003871 -
Acco11g1323 496 CDD RPA1_DBD_B_like 141 245 - -
Acco11g1323 496 Gene3D - 113 248 IPR012340 -
Acco11g1323 496 MobiDBLite consensus disorder prediction 469 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1323 Acco-ChrAcco11 27473903 27480210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1323 1 353 Core DNA Replication Machinery Family AT5G08020 20.403 1.42e-08 55.5