Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1319 ATGGCAGCTTGCACAGTGTACACAACACAATCTCTCAACACAAATTGCTCCTTCACAATCCCATCAAAAGCCCACTTGGGTTTTCACCAAAAACAGGTTCTTTTCTACAGAAGCAGAACCAGCAGTAGAAGTAGCAGCAGCAGCAGGCCATGGGTGATAACATGCGCCGCGGGTGACTCACAAACAGTAGTGATTGGTCTCGCAGCAGACTCAGGATGTGGGAAGAGTACCTTCATGAGGAGGCTTACAAGTGTGTTTGGAGGCACAGCAGAACCACCAAAAGGAGGGAATCCAGATTCCAACACCCTCATAAGTGACACAACCACAGTTATATGTTTGGATGATTATCACTCACTTGACAGAACAGGAAGGAAGGAAAAGGGAGTCACAGCACTTGACCCGAGAGCCAACAATTTTGATCTCATGTATGAACAAGTTAAGGCCATCAAAGAAGGTATTGCTGTTGAGAAACCCATTTACAACCATGTCACTGGTCTCTTGGACCCACCTGAGCTCATCAAGCCACCCAAGATCTTGGTCATAGAAGGCTTGCACCCGATGTTTGATCCCCGGGTCAGAGAACTATTGGACTTCAGCATCTACTTGGACATCAGCAATGAAGTGAAATTCGCCTGGAAAATTCAGAGAGACATGGCAGAACGTGGGCATAGCCTCGAAAGCATCAAAGCTAGTATCGAAGCAAGAAAACCCGATTTTGACGCATACATTGATCCTCAGAAACAATATGCAGATGCAGTGATAGAAGTGTTACCAACACAGCTAATACCAGATGATAATGAAGGGAAGATATTGAGAGTGAGATTGATACAGAAAGAAGGGGTTAAGCATTTTAGCCCAGTTTACTTGTTTGATGATGGCTCTACCATTTCATGGATTCCTTGTGGAAGGAAACTCACTTGCTCTTACCCTGGAATCAAATTCTTCTATGGTCCTGAAACTTACTATGGTCACGAGGTATCAGTTGTGGAGATGGATGGGCAATTTGACAGACTAGATGAGCTGATATATGTTGAGAGCCATCTAAGCAACCTGTCAACCAAGTTCTATGGAGAAGTTACACAACAAATGTTGAAGCATGCCGATTTCCCTGGCAGCAGCAATGGCACAGGTCTCTTCCAAACCATAGTTGGCTTGAAGATCAGAGATCTGTTTGAGCAGATTGTAGCAAGCAGGGTTAAGACACCAGTAAAATCAGCTAAAGCTTAA 1227 0.445 MAACTVYTTQSLNTNCSFTIPSKAHLGFHQKQVLFYRSRTSSRSSSSSRPWVITCAAGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGTAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAIKEGIAVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDPRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKHFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFFYGPETYYGHEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSSNGTGLFQTIVGLKIRDLFEQIVASRVKTPVKSAKA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1319 408 PRINTS Phosphoribulokinase family signature 178 196 IPR006082 GO:0005524|GO:0005975|GO:0008974
Acco11g1319 408 PRINTS Phosphoribulokinase family signature 231 254 IPR006082 GO:0005524|GO:0005975|GO:0008974
Acco11g1319 408 PRINTS Phosphoribulokinase family signature 69 86 IPR006082 GO:0005524|GO:0005975|GO:0008974
Acco11g1319 408 PRINTS Phosphoribulokinase family signature 213 230 IPR006082 GO:0005524|GO:0005975|GO:0008974
Acco11g1319 408 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 333 IPR027417 -
Acco11g1319 408 Gene3D - 59 293 IPR027417 -
Acco11g1319 408 CDD PRK 64 353 - -
Acco11g1319 408 Pfam Phosphoribulokinase / Uridine kinase family 64 262 IPR006083 GO:0005524|GO:0016301
Acco11g1319 408 ProSitePatterns Phosphoribulokinase signature. 213 226 IPR006082 GO:0005524|GO:0005975|GO:0008974
Acco11g1319 408 PANTHER URIDINE KINASE 46 297 - -
Acco11g1319 408 FunFam Phosphoribulokinase 59 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1319 Acco-ChrAcco11 27427068 27430336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1319 116 290 PRT Gene Family AT3G27440 26.966 8.30e-17 80.1