Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1317 ATGGCAGAAAGTCCTGTGTTGTTCCTGGTCGACAAGCTCACATCTTTACTGCAAGAAGAAGTTCAGCTTTTAAAGGGTGTTCGCACAGATGTTCAGTTCATTAAAGACGAACTAGAGCGACTCAAGGCAATCTTAAGAATGGCCGATGCTTTGGAAGACAAAGACCCGGAACTCAAAGTTTGGGTGAAGCAAGTCAGAGATGTGGCTCATGACATGGAAGACGCCATAGATGAATTCACTATTCGCCTTGTGAATCATCGTGGCCAACATGGCCACAACAATCATTCTGCTCTCAGAAGATTGGCAGCTATCAGAGCTCGCCATCGGATTGCTTCGGACATTCAAGAGATCAAAGGCAGAGTCGAACACATCTCCAAGGATGGTCGCACCATAACTGAGATTGGGTCAAGCTCGAATCAGAATTATACATCGAGGATTGATAGCCAACAAGATGCACTTCTGCTTGAGGAAGCTGATCTTGTGGGTATTGAGAAGCCAAAGAAGCAGCTAATTGATTTGCTTTACCAGGATGAAAAAGGAAAAGTAGTGATTCCAATCTATGGAATGGGAGGATTGGGGAAAACCACAGTGGCAAAGCAAGTCTATGATGATCCAAAAGTGAAGAAGCTTTTTAAGATGCACGCTTGGGTCACAGTCTCTCAATCCTTCAACATCAAAGAGCTTCTAAGAGACCTGGTTCAACAAGTTTTCAAAGTCATTGGAAAACCAGCTCCTGCAAAAATTGGCACAATGACAGTTGAGAATCTTAAGGAGGTGGTCAAGACTCGGCTTCAACAAAGTAGGTACCTCATTGTCCTCGACGACATATGGCGCGTAAATTCATGGGATTCTATCAAACTTGCTTTGCCTAACAACAGCTATGGTAGTAGAATAATTATGACAACAAGAAACAAAGATGTGGCACTTGCTTGCTGCACTGAGTTGCAGGGTAAGATCTATAACCTGGAATTCTTACCTCAGAATGAAGCGTGGTCTCTTTTTTGTAAGAAAACATTTCGCGGGAATTTGTGTCCTTCTCATTTGGAGGAGCCATGTAAGAGCATCTTGAAGAGATGTGGGGGATTGCCTCTTGCTATTGTTGCAATTAGTGGTGCATTGGCAACAAAAGATAGAACCAACATAGAAGAATGGTCAGTTGTTAGTAGAAGTATTGCTTCTGAGATTGAGAGCAATGACAAAATGGAGGATATGAACAAAGTGCTTTCTCTAAGTTTCAATGACCTGCCTTACTATCTTAAATCCTGCTTGTTGTACCTGATCATGTTCCCGCAGTTTTACGCCATCCAGCACATGAGGCTGATTCGCCTGTGGATAGCTGAAGGATTTGTCAATGGAGAAGAGGGAAGGACACCGGAAGAAGTTGCAGAGAGTTACCTGAAGGAGCTCTTGAACCGGAGTCTGATTCAAGTGGTGGAGAAACGCAGTGATGGCAGGATGAAGACTTGTCGTGTTCACGACTTTCTACGGGACTTCATCAATTTGAAGTCAAGAGATCAGAACTTTGCAACAATAGCAAGAGACCAGGACATAATCTGGCCAGAAAGAGTTCGCCGCTTATCAGTAATCAACAGTATGCAGAACATACAGCAACACAGGACATCATTCCAATTACGTTCTCTGCTAATGTTTTCTTTAGCAGATTCACATGATCATATCTCCATATCTGCGTTATTCCCACATGGCTGTAGGCTGCTCAGGGTGCTAGATCTGCAAGATGCGCCTTTGGAATCGTTTCCAACGGAAATTGTCAACCTTTACCACCTGAAGTATCTAAGCCTGAAGAACACAAAGGTGAAAACCATTCCAGGCTCCATAAAGAAGCTTCAAAACCTGGAGACATTAAACTTCAAACACTCCCTTATCACTGAATTGCCGGTTGAAATCTTGGAGCTGCATCGGCTTCGCCATCTCCTGGTGTATTATTATGAGATCGAATCCTATGCTCATTTCCACTCAAGACATGGTTTCAAGCTGCCTGGTCCAATAGGATGCATGCAATCTCTGCAAAAGCTTTGTTTCATTGAAGCAGACCAAGCAAGTCAAGACTTGATGGTTGAGCTAGGAAAGCTCACTCAACTCAGAAGGCTGGGCATAAGAAAGCTGAAGAAAGAACATGGAGCTGCTTTATGCTCATCCATTCAAAAAATGACCAATCTCAGGTCTTTGTCTATAACTGCAATAGAAGAAGATGAAATAATTGACATCCAAAACATTACAAAGCCACCTCCGTATTTGAGACAATTGTACTTATGTGGACGTTTAGAGAAGTTACCAGAATGGATACCCTCTCTACAGAATCTAGTAAGAGTGTACTTGAAATGGAGCAGGTTAGAGGAGGATCCTCTAGGGTATCTTCAAGATTTGCCGAATCTAACTCATCTCGAGTTCTTACAGGTTTATGTCGGCGAGACCCTGCATTTCAATGCAAGGAAGTTTCCAAGTTTGAAGCTTTTAGGGCTTGATGATTTGGGTGGATTGAAATCCTTAATAGTGGAGGAAGGATCAATGCCTAATCTGAAAAGATTGATTATCCAGAGATGTGGTTCATTGAAGCAAGTACCTTTAGGCATAGAACATTTGAGAAAGCTAAAAGCAATTGACTTTTTTGATATGCCTGATGAATTGATCAATGCTTTGAGTCCAAATGGAGGTGAAGATCATTGGAGAGTTGAACATGTACCCGCGGTATATTCAACCTACTGGAAATCTGGAACATGGGATGTCTTCTCATTGGAAACTTTTGGAGAAAGAGACAATTCTTCAAGTAGTAATAATGTTGCGACAAGAAGTCATGATATTCGTATACTTTGGAAGGTTTAA 2841 0.422 MAESPVLFLVDKLTSLLQEEVQLLKGVRTDVQFIKDELERLKAILRMADALEDKDPELKVWVKQVRDVAHDMEDAIDEFTIRLVNHRGQHGHNNHSALRRLAAIRARHRIASDIQEIKGRVEHISKDGRTITEIGSSSNQNYTSRIDSQQDALLLEEADLVGIEKPKKQLIDLLYQDEKGKVVIPIYGMGGLGKTTVAKQVYDDPKVKKLFKMHAWVTVSQSFNIKELLRDLVQQVFKVIGKPAPAKIGTMTVENLKEVVKTRLQQSRYLIVLDDIWRVNSWDSIKLALPNNSYGSRIIMTTRNKDVALACCTELQGKIYNLEFLPQNEAWSLFCKKTFRGNLCPSHLEEPCKSILKRCGGLPLAIVAISGALATKDRTNIEEWSVVSRSIASEIESNDKMEDMNKVLSLSFNDLPYYLKSCLLYLIMFPQFYAIQHMRLIRLWIAEGFVNGEEGRTPEEVAESYLKELLNRSLIQVVEKRSDGRMKTCRVHDFLRDFINLKSRDQNFATIARDQDIIWPERVRRLSVINSMQNIQQHRTSFQLRSLLMFSLADSHDHISISALFPHGCRLLRVLDLQDAPLESFPTEIVNLYHLKYLSLKNTKVKTIPGSIKKLQNLETLNFKHSLITELPVEILELHRLRHLLVYYYEIESYAHFHSRHGFKLPGPIGCMQSLQKLCFIEADQASQDLMVELGKLTQLRRLGIRKLKKEHGAALCSSIQKMTNLRSLSITAIEEDEIIDIQNITKPPPYLRQLYLCGRLEKLPEWIPSLQNLVRVYLKWSRLEEDPLGYLQDLPNLTHLEFLQVYVGETLHFNARKFPSLKLLGLDDLGGLKSLIVEEGSMPNLKRLIIQRCGSLKQVPLGIEHLRKLKAIDFFDMPDELINALSPNGGEDHWRVEHVPAVYSTYWKSGTWDVFSLETFGERDNSSSSNNVATRSHDIRILWKV 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1317 946 CDD RX-CC_like 2 126 IPR038005 -
Acco11g1317 946 Gene3D - 325 411 IPR042197 -
Acco11g1317 946 Gene3D - 412 500 IPR036388 -
Acco11g1317 946 Pfam Rx N-terminal domain 7 91 IPR041118 -
Acco11g1317 946 FunFam Probable disease resistance protein At1g63360 412 501 - -
Acco11g1317 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 426 IPR027417 -
Acco11g1317 946 Pfam NB-ARC domain 164 413 IPR002182 GO:0043531
Acco11g1317 946 Coils Coil 24 54 - -
Acco11g1317 946 FunFam Probable disease resistance protein At1g61300 144 314 - -
Acco11g1317 946 SUPERFAMILY L domain-like 490 881 - -
Acco11g1317 946 Gene3D - 6 111 - -
Acco11g1317 946 PRINTS Disease resistance protein signature 359 373 - -
Acco11g1317 946 PRINTS Disease resistance protein signature 841 857 - -
Acco11g1317 946 PRINTS Disease resistance protein signature 183 198 - -
Acco11g1317 946 PRINTS Disease resistance protein signature 263 277 - -
Acco11g1317 946 PANTHER DISEASE RESISTANCE PROTEIN RP 31 855 IPR044974 GO:0006952
Acco11g1317 946 Gene3D Ribonuclease Inhibitor 501 886 IPR032675 -
Acco11g1317 946 Gene3D - 143 316 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1317 Acco-ChrAcco11 27362331 27366092 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1317 183 626 WRKY Transcription Factor Family AT5G45050 22.440 3.21e-10 62.4