Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1315 ATGGCAGAAAGTCCTGTGTTGTTCCTGGTCGACAAGCTCACATCTTTACTGCAAGAAGAAGTTCAGCTTTTAAAGGGTGTTCGCTCAGATGTTCAGTTCATTAAAGACGAACTAGAGCGACTCAAGGCAATCTTAAGAATGGTCGATGCTTTGGAAGACAAAGACCCAGAACTCAAAGTTTGGGTGAAGCAAGTCAGAGATGTGGCTCATGACATGGAAGACGCCATAGATGAATTCACTATTCGCCTTGTGAATCATCGTGGCCAACATGGCCACAACAATGATTCTGCTCTCAGAAGATTGGCTGCAGCCATTAAAGACATCAGAGCTCGCCATCGGATTGCTTTGGACATTCAAGAGATCAAAGGCAGAGTCGAACACATCTCCAAGGATGGTCGCACCATAACTGAGATTGGGTCAAGCTCGAATCAGAATTATACGTCGAGGATTGATAGCCAACAAGATGCACTTCTGCTTGAGGAAGCTGATCTTGTGGGTATTGAGAAGCCAAAGAAGCAGCTAATTGATTTGCTTTACCAGGATGAAAAAGGAAAAGTGGTGATTCCAATCTATGGAATGGGAGGATTGGGGAAAACCACAGTGGCAAAGCAAGTCTATGATGATCCAAAAGTGAAGAAGCGTTTTAAGATGCACGCTTGGGTCACAGTCTCTCAATCCTTCAACATCAAAGAGCTTCTAAGAGACCTGGTTCAACAAGTTTTCAAAGTCATTGGAAAACCAGCTCCTGCAAAAATTGGCACAATGACAGTTGAGAATCTTAAGGAGGTGGTCAAGACTCGGCTTCAACAAAGTAGGTACCTCATTGTCCTCGACGACATATGGCGCGTAAATTCATGGGATTCTATCAAACTTGCTTTGCCTAACAACAGCTATGGTAGTAGAATAATTATGACAACAAGAAACAAAGATGTGGCACTTTCTTGCTGCACTGAGTTGCAGGGTAAGATCTATAACCTGGAATTCTTACCTCAGAATGAAGCGTGGTCTCTTTTTTGTAAGAAAACATTTCGCGGGAATTCGTGTCCTTCTCATTTGGAGGAGCCATGTAAGAGCATCTTGAAGAGATGTGGGGGGTTGCCTCTTGCTATTGTTGCAATTAGTGGTGCATTGGCAACAAAAGATAGAACCAACATAGAAGAATGGTCAGTTGTTAGTAGGAGTATTGCTTCTGAGATTGAGAGCAATGACAAAATGGTGGATATGAACAAAGTGCTTTCTCTAAGTTTCAATGACCTGCCTTACTATCTTAAATCCTGCTTGTTGTACCTGATCATGTTCCCGGAGTTTTACGCCATCCAGCACATGAGGCTGATTCGCCTGTGGATAGCTGAAGGGTTTGTCAATGGAGAAGAAGGAAGGACACCGGAAGAAGTTGCAGAGAGTTACCTGAAGGAGCTCTTGAACCGGAGTCTGATTCAAGTGGTGGAGAAACGCAGTGATGGCAGGATGAAGACTTGTCGTGTTCACGACTTTCTACGGGACATCATCAATTTGAAGTCAAGAGATCAGGACTTTGCAACAATAGCAAGAGACCAGGACACAATCTGGCCAGAGAGAGTTCGCCGCTTATCAGTAATCAACAGTTTGCAGGTCATACAGCAACACAGGACATCATTCCAATTACGTTCTCTGCTAATGTTTTCTTTAGCAGATTCACATGATCATATCTCCATATCTGCGTTATTCCCACATGGCTGTAGGCTGCTCAGGGTGCTAGATCTGCAAGATGCGCCTTTGGAATCGTTTCCAACGGAAATTGTCAACCTTTACCACCTGAAGTATCTAAGCCTGAAGAACACAAAGGTGAAAACCATTCCAGGCTCCATAAAGAAGCTTCAAAACCTGGAGACATTAAACCTCAAACACTCCCTTGTCGCTGAATTGCCGGTTGAAATCTTGGAGCTGCATCGGCTTCGCCATCTCCTGGTGTATTATTATGAGATCGAATCCTATGCTCATTTCCACTCAAGACATGGTTTCAAGCTGCCTGGTCCAATAGGATGCATGCAATCTCTGCAAAAGCTTTGTTTCATTGAAGCAGACCAAGCAAGTCAAGACTTGATGGTTGAGCTAGGAAAGCTCACTCAACTCAGAAGGCTAGGCATAAGAAAGCTGAAGAAAGAACATGGTGCCGCTTTATGCTCATCTATTCAAAAAATGACCAATCTCAGATCTTTGTCTATAACTGCAATAGAAGAAGATGAAATCATTGACATCCAAAACATTACCAAGCCACCTCCGTATTTGAGACAGTTGTACTTATGTGGACGTTTAGAGAAGTTACCAGAATGGATACCCTCTCTACAGAATCTAGTAAGAGTGTACTTGAAATGGAGCAGGTTAGAGGAGGATCCTCTAGGGTATCTTCAAGATTTGCCGAATCTAATTCATCTCGAGTTTTTACAGGTTTATGTCGGCGAGACGCTGCATTTCAATGCAGGGAAGTTTCCAAGTTTGAAGCTTTTAGGGCTTGATGATTTGGGTGGATTGAAATCCTTAATAGTGGAGGAAGGATCAATGCCTAATCTGAAAAGATTGATTATCCAGAGATGTGGTTCATTGAAGCAAGTACCTTTGGGCATAGAACATTTGAGAAAGCTAAAAGCAATTGACTTTTTTGATATGCCTGATGAATTGATCAATGCTTTGAGTCCAAATGGAGGTGAAGATCATTGGAGAGTTGAACATGTACCCGCGGTTTATTCAACCTACTCGAAATCTGGAACATGGGATGTCTTCTCATTGGAAACTTTTGGAGAGAGAGACACTTCTTCAAGTAGTAATAATGCTGCGACGAAAAGTCACGAGATTCGTATACTTTGGAAGGTTTAA 2853 0.4273 MAESPVLFLVDKLTSLLQEEVQLLKGVRSDVQFIKDELERLKAILRMVDALEDKDPELKVWVKQVRDVAHDMEDAIDEFTIRLVNHRGQHGHNNDSALRRLAAAIKDIRARHRIALDIQEIKGRVEHISKDGRTITEIGSSSNQNYTSRIDSQQDALLLEEADLVGIEKPKKQLIDLLYQDEKGKVVIPIYGMGGLGKTTVAKQVYDDPKVKKRFKMHAWVTVSQSFNIKELLRDLVQQVFKVIGKPAPAKIGTMTVENLKEVVKTRLQQSRYLIVLDDIWRVNSWDSIKLALPNNSYGSRIIMTTRNKDVALSCCTELQGKIYNLEFLPQNEAWSLFCKKTFRGNSCPSHLEEPCKSILKRCGGLPLAIVAISGALATKDRTNIEEWSVVSRSIASEIESNDKMVDMNKVLSLSFNDLPYYLKSCLLYLIMFPEFYAIQHMRLIRLWIAEGFVNGEEGRTPEEVAESYLKELLNRSLIQVVEKRSDGRMKTCRVHDFLRDIINLKSRDQDFATIARDQDTIWPERVRRLSVINSLQVIQQHRTSFQLRSLLMFSLADSHDHISISALFPHGCRLLRVLDLQDAPLESFPTEIVNLYHLKYLSLKNTKVKTIPGSIKKLQNLETLNLKHSLVAELPVEILELHRLRHLLVYYYEIESYAHFHSRHGFKLPGPIGCMQSLQKLCFIEADQASQDLMVELGKLTQLRRLGIRKLKKEHGAALCSSIQKMTNLRSLSITAIEEDEIIDIQNITKPPPYLRQLYLCGRLEKLPEWIPSLQNLVRVYLKWSRLEEDPLGYLQDLPNLIHLEFLQVYVGETLHFNAGKFPSLKLLGLDDLGGLKSLIVEEGSMPNLKRLIIQRCGSLKQVPLGIEHLRKLKAIDFFDMPDELINALSPNGGEDHWRVEHVPAVYSTYSKSGTWDVFSLETFGERDTSSSSNNAATKSHEIRILWKV 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1315 950 Pfam Leucine rich repeat 575 629 IPR001611 GO:0005515
Acco11g1315 950 Gene3D - 6 115 - -
Acco11g1315 950 Gene3D Ribonuclease Inhibitor 506 891 IPR032675 -
Acco11g1315 950 FunFam Probable disease resistance protein At1g63360 416 505 - -
Acco11g1315 950 Coils Coil 24 54 - -
Acco11g1315 950 Gene3D - 416 505 IPR036388 -
Acco11g1315 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 430 IPR027417 -
Acco11g1315 950 Pfam NB-ARC domain 168 417 IPR002182 GO:0043531
Acco11g1315 950 SUPERFAMILY L domain-like 495 885 - -
Acco11g1315 950 Gene3D - 329 415 IPR042197 -
Acco11g1315 950 Gene3D - 147 320 IPR027417 -
Acco11g1315 950 PRINTS Disease resistance protein signature 363 377 - -
Acco11g1315 950 PRINTS Disease resistance protein signature 187 202 - -
Acco11g1315 950 PRINTS Disease resistance protein signature 845 861 - -
Acco11g1315 950 PRINTS Disease resistance protein signature 267 281 - -
Acco11g1315 950 CDD RX-CC_like 2 130 IPR038005 -
Acco11g1315 950 FunFam Probable disease resistance protein At1g61300 148 318 - -
Acco11g1315 950 Pfam Rx N-terminal domain 7 90 IPR041118 -
Acco11g1315 950 PANTHER DISEASE RESISTANCE PROTEIN RP 31 859 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1315 Acco-ChrAcco11 27332427 27336131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1315 187 630 WRKY Transcription Factor Family AT5G45050 23.094 2.97e-10 62.4