Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1303 ATGGCGGGAGCACAGCCTGAATTTGAGCATCCCAGGAAGGCCTTCGGATGGGCAGCTAGGGATACTTCTGGAATTCTCTCTCCTTTTAACTTCTCTCGAAGGGAGACGGGAGACAAAGACGTGGCGTTCAAAGTGCTTTACTGTGGAGTATGCCACTCAGACCTCCACATGATCAACAACGAATGGGGCTACTCAGTCTACCCACTTGTACCTGGGCACGAGATTGCTGGGGTGGTCACAGAAGTGGGAGGCAAGGTAGAAAAGTTCAAAGTGGGAGATAAGGTTGGTGTGGGATACGTGGTTGGGTCGTGCCGATCCTGTGAAAGCTGTTCCGACGACCTTGAGAATTACTGCTCCAGTCAGATTCCGACATCCGGTGCCAGGTATGCGGATGGAACTATCACATATGGAGGCTACTCTGACTTTATGGTAGCAGATGAGCACTTTGTGGTTGGCTTTCCAGATGCTTTGCCTCTTGATGCGGCGGCTCCTCTGCTATGTGCCGGAATCACAGTGTATAGCCCTTTGAGACACTATGGTCTGGACAAGCCAGGCCTTCATGTGGGCGTGGTTGGTCTCGGTGGGCTTGGCCATATGGCTGTCAAGTTTGCCAAAGCTTTTGGAGTTAAGGTCACTGTCATAAGCACGTCTCCAAACAAGAAGAACGAAGCCATTGATCACCTTGGAGCTGATTCCTTTATTGTCAGTCGTGAGCAAGATCAGATGCAGGCTGCAATGGGTACTTTTGATGGGATCATTGACACCGTTTCTGCACAACATCTTCTGGTGCCTTTAATTGGTCTGTTGAAGTCTAATGGAAAACTTGTGTTGGTGGGTGCACCTGAAAAGCCCCTGGAATTTCCTGCTTTCTCTTTAATTGCAGGGAGAAAGATCGTAGCTGGGAGTTTGATTGGTGGGATGAAGGAAACACAAGAAATGGTTGATTTTGCTGCTAAGCACAATGTGAAACCTGACATTGAAGTTATTCCAGTGGACTACGTGAATACTGCAATGAAGCGTCTTCTTAAAGCTGACGTCAAGTATCGTTTTGTGATTGACATTGCCAACACATTGTTAAAGCCAACCTCTTAA 1092 0.4808 MAGAQPEFEHPRKAFGWAARDTSGILSPFNFSRRETGDKDVAFKVLYCGVCHSDLHMINNEWGYSVYPLVPGHEIAGVVTEVGGKVEKFKVGDKVGVGYVVGSCRSCESCSDDLENYCSSQIPTSGARYADGTITYGGYSDFMVADEHFVVGFPDALPLDAAAPLLCAGITVYSPLRHYGLDKPGLHVGVVGLGGLGHMAVKFAKAFGVKVTVISTSPNKKNEAIDHLGADSFIVSREQDQMQAAMGTFDGIIDTVSAQHLLVPLIGLLKSNGKLVLVGAPEKPLEFPAFSLIAGRKIVAGSLIGGMKETQEMVDFAAKHNVKPDIEVIPVDYVNTAMKRLLKADVKYRFVIDIANTLLKPTS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1303 363 Gene3D - 17 354 - -
Acco11g1303 363 FunFam Uncharacterized protein 17 167 - -
Acco11g1303 363 FunFam Putative cinnamyl alcohol dehydrogenase 6 325 354 - -
Acco11g1303 363 Pfam Zinc-binding dehydrogenase 195 318 IPR013149 -
Acco11g1303 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Acco11g1303 363 FunFam Cinnamyl alcohol dehydrogenase 168 324 - -
Acco11g1303 363 Pfam Alcohol dehydrogenase GroES-like domain 39 151 IPR013154 -
Acco11g1303 363 CDD CAD1 15 353 IPR047109 GO:0016616
Acco11g1303 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 323 IPR036291 -
Acco11g1303 363 SMART PKS_ER_names_mod 24 352 IPR020843 GO:0016491
Acco11g1303 363 Gene3D - 168 324 - -
Acco11g1303 363 SUPERFAMILY GroES-like 22 185 IPR011032 -
Acco11g1303 363 PANTHER ALDEHYDE REDUCTASE 6 357 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1303 Acco-ChrAcco11 27236617 27238142 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1303 12 362 Monolignol Biosynthesis Gene Families AT4G37990 70.370 1.43e-170 478