Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1302 ATGTAAAACCTAAGATGCTTGGACGCTGATGTGGACATGGGACACAACACTGAAATGGACAATGACATGGGAAAATCTGAAGTTTCTACTTGTCTGCGCTTCATAGATGAAAACTGTGTCAAAGCTTTTCCTTTTCATCAATCTTTGGTGAAAGCGCGAGAAGATAAACTTATGCATGTCACAGCTGAACCATCTCAAAATGGAGGTTCGATGCATGCTCCACAAAACGGGGGACTTAATGCACCTCACAATATGGTCAATCAAAAATATGAGTATCTTGCCTATCCCTGCTGCTGGTGCTCCTTTTGGAGTTTCTGGTCCCACGACAAATTTAAATATAATTGGGGTGCACCCACTTCATCCACTATTCCTGCACTGCGTGGAAAGGTTCCTTCTGCTGGATCACGGGAGAGTGTTCAGTCACAACTTTGGCTGCAGGATGAAAGAGAGCTAAAGAGACAAAGACGGAAACAGTCTAATAGGGAATCAGCTCGGAGACCTAGGTTCCGCAAACAGGCTGAAAGTGACGAACTAGCCCAGCGAGCTGAGGCCTTAAAAGAAGAGAATGCTACTATCCGCTCTCAGAAAATGCTGCCCTCAAGCATGCTATCTATCATAATATATATATATATGCAGGAAAAACTTGGGGAATCTCCTGAGAATGAGGAACAGAGGCCGAGCCGGAAGGACCAACGTGTGGATAGTGACACTCAACAGGCTGAGCAGACAGAAGCCGTGCAGGGTAGTCATTAA 753 0.4529 MXNLRCLDADVDMGHNTEMDNDMGKSEVSTCLRFIDENCVKAFPFHQSLVKAREDKLMHVTAEPSQNGGSMHAPQNGGLNAPHNMVNQKYEYLAYPCCWCSFWSFWSHDKFKYNWGAPTSSTIPALRGKVPSAGSRESVQSQLWLQDERELKRQRRKQSNRESARRPRFRKQAESDELAQRAEALKEENATIRSQKMLPSSMLSIIIYIYMQEKLGESPENEEQRPSRKDQRVDSDTQQAEQTEAVQGSH 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1302 250 MobiDBLite consensus disorder prediction 216 237 - -
Acco11g1302 250 PANTHER G-BOX-BINDING FACTOR 3-RELATED 115 196 IPR044827 GO:0003700|GO:0006355|GO:0043565
Acco11g1302 250 SMART brlzneu 148 212 IPR004827 GO:0003700|GO:0006355
Acco11g1302 250 MobiDBLite consensus disorder prediction 214 250 - -
Acco11g1302 250 Coils Coil 168 195 - -
Acco11g1302 250 MobiDBLite consensus disorder prediction 150 177 - -
Acco11g1302 250 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 150 195 IPR004827 GO:0003700|GO:0006355
Acco11g1302 250 SUPERFAMILY Leucine zipper domain 151 196 IPR046347 GO:0003700|GO:0006355
Acco11g1302 250 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 155 170 IPR004827 GO:0003700|GO:0006355
Acco11g1302 250 Gene3D - 151 202 - -
Acco11g1302 250 CDD bZIP_plant_GBF1 153 195 IPR045314 GO:0003700|GO:0006355
Acco11g1302 250 Pfam bZIP transcription factor 148 194 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1302 Acco-ChrAcco11 27232850 27235453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1302 65 195 bZIP Transcription Factor Family AT2G35530 50.725 3.45e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco11g1302 bZIP_1 9e-13 CL0018