Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1300 ATGTCACAGGAGCTTTCTTCGACCCCTGGCACTGGTACAATTAATCCTGATTGGTCCAGCTTTCAGGCATATTCTCCAATGCCTCCACATGGGTTCTTAGCATCAAGTCCTCAAGCTCACTCATATCTGTGGGGTGTCCAGCATATTATGCCTCCTTATGGTACCCCACCACATCCATATGTTGCAATGTATCCTCATGGTGGTATATATGCTCATCCATCTATGCCTTCGGTATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCGAATGGTATTGCTGAGCCTTCAGGCAATACTCTTGGCAACATGGAAGCTGACGGTAAGCCTCCTGACGTGAAGGAAAAATTGCCGATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACAGGAAAGGATGTCCAACATGGTAAAGCGCCAGGGACATCTGCTAATGGAGTTCTTTCAAAAAGTGGTGAAAGTGCGAGTGAAGGTACTAGTGAAGGAAGTGATTCAACTTCTCAGAATGACTCGCAGCTGAAATCAGAGGGAAGGCAGGGCTCTTTAGGAGCTGAACCATCTCAAAATGGAGGTTCGATGCATGCTCCACAAAACGGGGGACTTAATGGACCTCACAATATGGTCAATCAAAATATGAGTATGTTACCTATCCCTGCTGCCGGTGCTCCTGTTGGAGTTTCCGGTCCCACGACAAATTTAAATATAGGAATGGATTATTGGGGTGCACCCACTTCATCTGCTATTCCTGCACTGCGTGGAAAGGTTCCTTCTGCTGGGTCACGGGAGAGTGTTCAGTCACAACTTTGGCTGCAGGATGAAAGGGAGCTAAAGAGACAAAGACGAAAGCAGTCTAATAGGGAATCAGCTCGCAGATCTAGGTTGCGCAAACAGGCTGAATGTGATGAACTAGCTCAACGAGCTGAGGCTTTAAAAGAAGAGAATGCTACTATCCGCGTTGAAGTGAATCAGATAAGGAGTGAGTACGAGCAGCTGCTCTCAGAAAATGCTGCCCTCAAGGAAAAACTTGGGGAATCTCCTGAGAATGAGGAACAGAGGGCGAGCCGGAAGAACCAACATGTGGATAGTGACACTCAACAGGCTGAGCAGACGGAAGCCATGCAGGGAAGTCATTGA 1143 0.4672 MSQELSSTPGTGTINPDWSSFQAYSPMPPHGFLASSPQAHSYLWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPSVSYPFSPFAMPSPNGIAEPSGNTLGNMEADGKPPDVKEKLPIKRSKGSLGSLNMITGKDVQHGKAPGTSANGVLSKSGESASEGTSEGSDSTSQNDSQLKSEGRQGSLGAEPSQNGGSMHAPQNGGLNGPHNMVNQNMSMLPIPAAGAPVGVSGPTTNLNIGMDYWGAPTSSAIPALRGKVPSAGSRESVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENATIRVEVNQIRSEYEQLLSENAALKEKLGESPENEEQRASRKNQHVDSDTQQAEQTEAMQGSH 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1300 380 CDD bZIP_plant_GBF1 281 331 IPR045314 GO:0003700|GO:0006355
Acco11g1300 380 MobiDBLite consensus disorder prediction 339 380 - -
Acco11g1300 380 Pfam bZIP transcription factor 276 338 IPR004827 GO:0003700|GO:0006355
Acco11g1300 380 Gene3D - 279 351 - -
Acco11g1300 380 PANTHER G-BOX-BINDING FACTOR 3-RELATED 12 369 IPR044827 GO:0003700|GO:0006355|GO:0043565
Acco11g1300 380 MobiDBLite consensus disorder prediction 243 302 - -
Acco11g1300 380 Pfam G-box binding protein MFMR 7 76 IPR012900 -
Acco11g1300 380 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 278 341 IPR004827 GO:0003700|GO:0006355
Acco11g1300 380 Coils Coil 296 344 - -
Acco11g1300 380 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 283 298 IPR004827 GO:0003700|GO:0006355
Acco11g1300 380 MobiDBLite consensus disorder prediction 145 199 - -
Acco11g1300 380 Pfam Disordered region downstream of MFMR 115 252 - -
Acco11g1300 380 MobiDBLite consensus disorder prediction 93 213 - -
Acco11g1300 380 MobiDBLite consensus disorder prediction 366 380 - -
Acco11g1300 380 SMART brlzneu 276 340 IPR004827 GO:0003700|GO:0006355
Acco11g1300 380 MobiDBLite consensus disorder prediction 343 365 - -
Acco11g1300 380 SUPERFAMILY Leucine zipper domain 279 335 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1300 Acco-ChrAcco11 27219029 27225997 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1300 3 374 bZIP Transcription Factor Family AT2G35530 61.316 8.36e-156 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco11g1300 MFMR_assoc 1.4e-54 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1300 11 27219029 27225997 Acco11g1300 11 27219029 27225997 ECH