Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1293 ATGATGGAGCTATTCCCAGCACAGCCAGATTTGTCTCTGCAAATCAGCCCTCCAAACACCAAACCCACCACTTCAAGTTGGAGCAGTAGAGATAATAATACTAATAATAATGGCGGAGGCTGGAAGAGAGCTTTAGACTCCTCTCACTCTCACTCCTCCATGCCCAAATCCAAACCTTGCCAAACTAATAATCTCATTCACCACCATCAATCCTTCGACCTCTCCCTGTCCTCCACACCTCCTCCTTCTTCTTCACTCTGCAACAACAATAACAACTTCCACCACTACCACCGTCATTTACTCCAAAACGGCGTCAATAATGCCAATACGTCGTCGTTTCGCCACAGCCTGGGATTTCTCAGACCCATCAGAGGGATCCCTCTCTACCAAAACCCTCCTTCTAATATCCCATTCGGCGCTCTTGTTGATGCTCATACTAATTATTCAACTCCCCTTCCTCCTCCATCATCTCTATCTAACAACAGTAATACAACCTCCTCGTCAAGCCCTTTTCATTCGACTCACCACCACCACCAAGGTTTGATGACAAGGTCGACGTTGTTGTCTCGTTTCCCCGCTAAGCGAAGCATGAGAGCCCCTCGCATGCGTTGGACTACCACCCTCCATGCTCGCTTTGTCCACGCCGTCGAGCTCCTCGGCGGCCATGAAAGGGCAACGCCAAAGTCAGTTCTTGAGCTCATGGATGTCAAGGATCTCACTTTAGCTCATGTTAAATCTCATCTTCAGATGTACCGAACGGTGAAAACCACAGATAAAGCAGCTGCTGCTTCCTCAGGGCAATCTGATGTATATGACAATGGATCATCTGGAGATAATTCTGAAGATTTCATGTTTGACATGAACAATTCATCAAGAAGGTCCAATGTATCTACCAAGCAAGCAAAAGAAGGCGTTAATCGTGATAAAGAACATCATGGGCTTTGGAGCAACTCTTCCAGGGAAGCTTGGTTGCAGGGGAAGCCAAAGCTGGATTATTGTGCAGGAAACTTGAGTTCTTTTGAGAAGGAAATGGATCCAAAATGCCTAAGTTACGAGAGAGTATCAGATGGAAGTGCATCGTCAGATGTTTCAGGAACAAGCCCCAAGAAACCAAATTTAGATTTGGAGTTTAGCTTAGGGCAGCCACTTTGA 1152 0.4635 MMELFPAQPDLSLQISPPNTKPTTSSWSSRDNNTNNNGGGWKRALDSSHSHSSMPKSKPCQTNNLIHHHQSFDLSLSSTPPPSSSLCNNNNNFHHYHRHLLQNGVNNANTSSFRHSLGFLRPIRGIPLYQNPPSNIPFGALVDAHTNYSTPLPPPSSLSNNSNTTSSSSPFHSTHHHHQGLMTRSTLLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAAASSGQSDVYDNGSSGDNSEDFMFDMNNSSRRSNVSTKQAKEGVNRDKEHHGLWSNSSREAWLQGKPKLDYCAGNLSSFEKEMDPKCLSYERVSDGSASSDVSGTSPKKPNLDLEFSLGQPL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1293 383 Gene3D - 199 256 - -
Acco11g1293 383 MobiDBLite consensus disorder prediction 261 301 - -
Acco11g1293 383 MobiDBLite consensus disorder prediction 353 383 - -
Acco11g1293 383 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 9 382 IPR044847 GO:0000976|GO:0006355|GO:0010158
Acco11g1293 383 Pfam Myb-like DNA-binding domain 201 252 IPR001005 -
Acco11g1293 383 MobiDBLite consensus disorder prediction 151 183 - -
Acco11g1293 383 MobiDBLite consensus disorder prediction 1 63 - -
Acco11g1293 383 NCBIfam myb-like DNA-binding domain, SHAQKYF class 200 253 IPR006447 GO:0003677
Acco11g1293 383 MobiDBLite consensus disorder prediction 261 320 - -
Acco11g1293 383 SUPERFAMILY Homeodomain-like 197 253 IPR009057 -
Acco11g1293 383 MobiDBLite consensus disorder prediction 302 316 - -
Acco11g1293 383 MobiDBLite consensus disorder prediction 354 368 - -
Acco11g1293 383 MobiDBLite consensus disorder prediction 12 63 - -
Acco11g1293 383 FunFam Myb family transcription factor 198 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1293 Acco-ChrAcco11 27124157 27128679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1293 2 382 G2-like Transcription Factor Family AT4G17695 39.637 1.07e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco11g1293 Myb_DNA-binding 1.8e-05 CL0123