Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1275 ATGTCAGACCGGAGTACATTATCCGGCGTCGCTGTCTCACCGGAGGAGGGAAAGAAGAAGGAAGAAGGAGGGGGAAATAAGGAGAGAAAAGTTCCTTTTTTGAAGTTGTTCTCTTTCGCTGATTCCTATGATTATGTGCTAATGACCATTGGATCTGTCGGTGCATGTGTTCATGGTGCTTCTGTTCCTGTTTTCTTCATCTTCTTCGGAAAGTTAATCAATGTCATTGGTCTCGCTCACCTCTTTCCCCAGCAAGCTTCTCACCAAGTTGCCAAGTATTCGTTGGATTTTGTGTATCTGAGTATAGTAATCTTGTTTTCGTCTTGGACAGAGGTGGCATGTTGGATGCATAGTGGAGAACGACAAACAGCGAAAATGAGAATGGCATATTTAAGATCAATGTTAAATCAAGACGTAAGTTTGTTTGATACAGAAGCTTCAACTGGGGAGGTCATTTCTGCAATTTCCAGCGAGATTCTCGTTGTTCAAGATGCTGTCTCTGAGAAGGTATATATTAATGGCTTCTTCCTTCTTCTTATTTTTTAG 546 0.4158 MSDRSTLSGVAVSPEEGKKKEEGGGNKERKVPFLKLFSFADSYDYVLMTIGSVGACVHGASVPVFFIFFGKLINVIGLAHLFPQQASHQVAKYSLDFVYLSIVILFSSWTEVACWMHSGERQTAKMRMAYLRSMLNQDVSLFDTEASTGEVISAISSEILVVQDAVSEKVYINGFFLLLIF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1275 181 SUPERFAMILY ABC transporter transmembrane region 36 170 IPR036640 GO:0005524|GO:0016020
Acco11g1275 181 MobiDBLite consensus disorder prediction 1 26 - -
Acco11g1275 181 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 50 181 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco11g1275 181 PANTHER ABC TRANSPORTER B FAMILY 15 170 IPR039421 -
Acco11g1275 181 Gene3D ABC transporter type 1, transmembrane domain 26 181 IPR036640 GO:0005524|GO:0016020
Acco11g1275 181 Pfam ABC transporter transmembrane region 49 178 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1275 Acco-ChrAcco11 26836833 26837670 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1275 15 170 Calmodulin-binding Proteins AT2G36910 50.000 1.36e-43 152