Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco11g1266 | ATGGATTATGGTAGAGATGGGAACGTCGTTCAAATAATCACCGGTGGCGGTGGAAATGAAAACTGGTCCAGTGACCAGGCCGTTTGGGCGACGGAAGACGATTATCGATTCTGGAACAACGGGGACGCCGACACTCCCTCGGACTCGAATTACGATCAAAGGCAGTCCCAATCACGATCTGGGAGCGAACCCCCAAATAAGAAATCTAGGAATTCTCAGGATGCGACTTCATTGAATCGGTCCAAAACTATTGGGAAAATGTTCTTCAAGACTAAACTGTGTTGCAAATTCCGGGCCGGTACGTGTCCTTATATCACTAATTGCAATTTCGCCCACAGTGTTGAAGAGCTTCGTCGGCCACCGCCGAATTGGCAAGAAATTGTGGCTGCTCATGAAGAGGAAAAATCCATAATGTCAGAACCAAGAGAAGAGTTTCAAATTCCGTCCATTGGGTCGTCCGGGTTTGCTGGGGAGATGCAGAGAGCGTATAAAGGTCGCCATTGCAAGAAGTTTTACACGGAAGAAGGATGCCCATATGGAGATAATTGTACATTTCTTCATGACGAACAATCTAGGAATCGTGAGAGTGTGGCTATAAGTTTAGGTCCTGGTGGGTATGGTGGTGCTGGCAATGGCTCTAATTCCAAGCCATCAAATTGGAAAACACGGATTTGCAATAAATGGGAGATGACTGGGTATTGCCCATTTGGAAATAAATGCCATTTTGCTCATGGCGCTGCAGAGTTGCACCGATATGGCGGGGGGGCTATGGAGGGAGAAAATAGAGACCCTGCATCTGCTACTGCTCCTGACACGAAGCAGGGCGGGGTGCCTTCAAAAACGCCTTTTGATAACGTCATTTCATCGGTCACTCCTGTGGCTCATCCAGATGTCTATCATATCGGAGTTCCTTCACAAAGGTCTTCCATTGTGATTCAGAGGCCAGGCCAGAGAGCTCATCAGAAGTGGAAAGGTCCAGATAAAATCAGTAGGATATATGGTGATTGGATTGATGAGTTGGAATGA | 1026 | 0.4717 | MDYGRDGNVVQIITGGGGNENWSSDQAVWATEDDYRFWNNGDADTPSDSNYDQRQSQSRSGSEPPNKKSRNSQDATSLNRSKTIGKMFFKTKLCCKFRAGTCPYITNCNFAHSVEELRRPPPNWQEIVAAHEEEKSIMSEPREEFQIPSIGSSGFAGEMQRAYKGRHCKKFYTEEGCPYGDNCTFLHDEQSRNRESVAISLGPGGYGGAGNGSNSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGAAELHRYGGGAMEGENRDPASATAPDTKQGGVPSKTPFDNVISSVTPVAHPDVYHIGVPSQRSSIVIQRPGQRAHQKWKGPDKISRIYGDWIDELE | 341 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco11g1266 | 341 | MobiDBLite | consensus disorder prediction | 35 | 77 | - | - | |
Acco11g1266 | 341 | Gene3D | - | 156 | 202 | - | - | |
Acco11g1266 | 341 | SUPERFAMILY | CCCH zinc finger | 217 | 250 | IPR036855 | GO:0046872 | |
Acco11g1266 | 341 | ProSiteProfiles | Zinc finger C3H1-type profile. | 219 | 247 | IPR000571 | GO:0046872 | |
Acco11g1266 | 341 | SMART | c3hfinal6 | 88 | 114 | IPR000571 | GO:0046872 | |
Acco11g1266 | 341 | SMART | c3hfinal6 | 162 | 189 | IPR000571 | GO:0046872 | |
Acco11g1266 | 341 | SMART | c3hfinal6 | 219 | 246 | IPR000571 | GO:0046872 | |
Acco11g1266 | 341 | ProSiteProfiles | Zinc finger C3H1-type profile. | 162 | 190 | IPR000571 | GO:0046872 | |
Acco11g1266 | 341 | PANTHER | CCCH ZINC FINGER/TIS11-RELATED | 212 | 268 | IPR045877 | GO:0003729 | |
Acco11g1266 | 341 | Gene3D | - | 83 | 119 | - | - | |
Acco11g1266 | 341 | Gene3D | - | 212 | 251 | - | - | |
Acco11g1266 | 341 | ProSiteProfiles | Zinc finger C3H1-type profile. | 88 | 115 | IPR000571 | GO:0046872 | |
Acco11g1266 | 341 | MobiDBLite | consensus disorder prediction | 200 | 219 | - | - | |
Acco11g1266 | 341 | FunFam | Zinc finger CCCH domain-containing protein | 84 | 120 | - | - | |
Acco11g1266 | 341 | FunFam | Zinc finger, CCCH-type | 156 | 194 | - | - | |
Acco11g1266 | 341 | FunFam | zinc finger CCCH domain-containing protein 15-like | 213 | 252 | - | - | |
Acco11g1266 | 341 | MobiDBLite | consensus disorder prediction | 255 | 281 | - | - | |
Acco11g1266 | 341 | MobiDBLite | consensus disorder prediction | 42 | 77 | - | - | |
Acco11g1266 | 341 | Pfam | CCCH-type zinc finger | 166 | 188 | IPR041367 | - | |
Acco11g1266 | 341 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 89 | 113 | IPR000571 | GO:0046872 | |
Acco11g1266 | 341 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 220 | 245 | IPR000571 | GO:0046872 | |
Acco11g1266 | 341 | SUPERFAMILY | CCCH zinc finger | 86 | 119 | IPR036855 | GO:0046872 | |
Acco11g1266 | 341 | SUPERFAMILY | CCCH zinc finger | 162 | 190 | IPR036855 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco11g1266 | Acco-ChrAcco11 | 26615260 | 26618959 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco11g1266 | 221 | 249 | C3H Transcription Factor Family | AT1G68200 | 62.069 | 2.88e-07 | 49.7 |