Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1264 ATGGCTCTGCCTGAGACTCTTTCGTCTAATGAGCTTTACAATTTCATCATCCATGAGACTATCTCTGCAACCCCATTTAGCAGCCATTGTGATTCCTCCCCTGAAGCTAATGTCATGTTGGAAAACAGAGCAATGAATCCTCTGGAACATGACCCTGCATCATCGTTTGGTAATGTTCTTTCTCGTTCAAGGAAACGCCATTCCGATGAGCTTGAGGTTCCTGCGGTTGTGCAAGGAAGGAAGAGGAGGAGAAGGAAGCCAAGAGTTTGTAAGAACAAAGAAGAAGCTGAGACTCAGAGAATGACTCACATTGCTGTCGAAAGAAACCGCCGCAAGCAGATGAATGAGCACCTCTCCGTCCTCCGTTCACTCATGCCTGAATCCTACGTCCAAAGGGGTGACCAGGCCTCTATCGTGGGTGGTGCGATAGAATTTGTGAAGGCGCTTGAACAATTGTTGCAGTCACTTGAAGCTAAGAAGTTGCAGATTCTGCTACAAGTAGTAGTAGCACAAACTAATAATGAAGATTCTTCTTCTTCATCTTCTTCTTGTTCTGCTTCTTCCATTTTCAAACTCATGAATCCTCCATTTTCACAATTCTTTGCGTATCCTCAGTACACATGGTCTCAGGCTCCAACCAAATACCCTTCTAAGACCAAGGCAGCCATAGCTGATATTGAGGTTACTTTGATAGAGACACATGCAAACCTTAGAATTCTGTCAAGAAGAAGCCCCAGGCAATTGTCAAAACTGGTCTCTGCTTTTCAAACACTCTGCCTCACCATCCTTCATCTTAATGTCACCACCATTGACCCTTTGGTGCTTTATTCTATCAGTGCCAAGGTTGAAGAAGGATGCCACCTTGGCTCTGCGGAGGATATAGCAACTGCAGTTCATCACTTGCTCAGAAGAATTGAGGAAGAAGCTTCCCTATGCGGGTGA 942 0.4501 MALPETLSSNELYNFIIHETISATPFSSHCDSSPEANVMLENRAMNPLEHDPASSFGNVLSRSRKRHSDELEVPAVVQGRKRRRRKPRVCKNKEEAETQRMTHIAVERNRRKQMNEHLSVLRSLMPESYVQRGDQASIVGGAIEFVKALEQLLQSLEAKKLQILLQVVVAQTNNEDSSSSSSSCSASSIFKLMNPPFSQFFAYPQYTWSQAPTKYPSKTKAAIADIEVTLIETHANLRILSRRSPRQLSKLVSAFQTLCLTILHLNVTTIDPLVLYSISAKVEEGCHLGSAEDIATAVHHLLRRIEEEASLCG 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1264 313 CDD bHLH_AtFAMA_like 101 160 - -
Acco11g1264 313 Pfam Helix-loop-helix DNA-binding domain 99 150 IPR011598 GO:0046983
Acco11g1264 313 SMART finulus 104 155 IPR011598 GO:0046983
Acco11g1264 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 97 167 IPR036638 GO:0046983
Acco11g1264 313 Gene3D - 90 164 IPR036638 GO:0046983
Acco11g1264 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 98 149 IPR011598 GO:0046983
Acco11g1264 313 Coils Coil 146 166 - -
Acco11g1264 313 PANTHER MAX DIMERIZATION, MAD 49 309 - -
Acco11g1264 313 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1264 Acco-ChrAcco11 26596394 26598129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1264 90 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 55.959 1.53e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco11g1264 HLH 2e-10 No_clan