Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1260 ATGGCCATCGAAACCCACGACACTACTGTCATGGAAATCAAGCCCAAGAACAGGAGAATCATGGGTGCTGGAGGTCCTGATGACGAGGACAATAGGTGGCCGCCATGGTTGAATCCTCTGCTCAAAGAAAGCTTCTTTGTTCAATGCAAGGTCCACGTTGATTCTCACAAGAGCGAATGTAATATGTATTGCTTGGATTGTATGAACGGCGCTCTCTGTTCTCTCTGCCTCGCCCACCACAGAGACCACCGTTTTATTCAGATAAGGAGGTCATCTTACCACGATGTGATTAGGGTGAATGAGATTCAGAAAGTCCTGGACATATCTGGAGTTCAGACCTACGTTATCAACAGCGCTAGGGTAGTGTTCTTGAACGAGAGGCCTCAGCCTAGGCCCGGCAAGGGCGTTACCAACACTTGTGAAGTCTGCGAGCGTAGCCTCCTCGATTCCTACCGATTCTGTTCTCTCGGTTGCAAGATTGTGGGGACATCGATGGATTTCCAGAAGAAGAAAAGGTCAGCGGCGGTGGCATTTGCATCGGAGTCAGAGGATTCATACAGCAGCAACAGCGGCAGCCGCCACCACCACCACCACCACGGCCGGCACAAGAACAGTAGGGTTCAGAGCTTCACACCGTCAACGCCGCCGCCAACATCGGCGAGTTTCAGAACGGCCAAGAGAAGAAAGGGAATTCCACACAGAGCACCAATGGGAGGACTAATAATCATAGAATACTAA 738 0.5081 MAIETHDTTVMEIKPKNRRIMGAGGPDDEDNRWPPWLNPLLKESFFVQCKVHVDSHKSECNMYCLDCMNGALCSLCLAHHRDHRFIQIRRSSYHDVIRVNEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSMDFQKKKRSAAVAFASESEDSYSSNSGSRHHHHHHGRHKNSRVQSFTPSTPPPTSASFRTAKRRKGIPHRAPMGGLIIIEY 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1260 245 CDD Bbox2 49 88 - -
Acco11g1260 245 MobiDBLite consensus disorder prediction 206 221 - -
Acco11g1260 245 MobiDBLite consensus disorder prediction 184 233 - -
Acco11g1260 245 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 27 237 - -
Acco11g1260 245 Pfam PLATZ transcription factor 89 160 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1260 Acco-ChrAcco11 26541970 26543365 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Acco11g1260 PLATZ 3.4e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1260 11 26541970 26543365 Acco11g1260 11 26541970 26543365 ECH