Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1237 ATGGATGATTTATCTCTTTTTGAGTTCTATGCGTTTGTGGGTTTTCCACGTGCTTGCTTCTTTATCGTTCCAGATTTTGATCGTGCTCTCAAGGGTTTTGTGGCCGGAGAAGGAGGTGTAGGAAAACCGAAGATGGATTTGGAAGCAGGGGCTCTGGATTCCAAGATGAAGGGTGTTGGAAAAATTAGCAGTAATGATAAAATTTTCAGAGCTCTCATGGGACCTATGGTACTGTTTAAAGAGGCACCTATGATAACCAAGATGTTGCAGAATTTGAAGCCAGAAATCCCACAATGTTGTCCGACGTCTTTGGCTAATATCATGAGGAAATGTTGGGATGGGAACCCAGACAAGCGTCCAGAAATGGGCGAGGTGGTGAGTTTTCTGGAAGCCATAGATACAAGCAAATGA 411 0.4355 MDDLSLFEFYAFVGFPRACFFIVPDFDRALKGFVAGEGGVGKPKMDLEAGALDSKMKGVGKISSNDKIFRALMGPMVLFKEAPMITKMLQNLKPEIPQCCPTSLANIMRKCWDGNPDKRPEMGEVVSFLEAIDTSK 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1237 136 Gene3D Transferase(Phosphotransferase) domain 1 65 136 - -
Acco11g1237 136 Pfam Protein tyrosine and serine/threonine kinase 77 129 IPR001245 GO:0004672|GO:0006468
Acco11g1237 136 SUPERFAMILY Protein kinase-like (PK-like) 82 132 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1237 Acco-ChrAcco11 26140775 26142408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1237 88 136 MAP Kinase Kinase Kinase AT4G14780 71.429 5.35e-21 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Acco11g1237 PK_Tyr_Ser-Thr 2.6e-07 CL0016