Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1225 ATGGCTAGTCATCAACCCAATAATATTCCCGCCCGTCGTGATCATCATCAGCAGCATCAGCATCAAGCAGAAACTGTGATTAACGTTAAGAGGTCGGTGAACTTCACCGGAGGGCTTGAGTTTTCAGGCCTGACCTACACGGTGACCAAGGAGAAGAAGGTTAACCAGAGCAAGGTGAAGGAGAAAGTTGACTTGCTTCATAACATTACCGGCTATGCACCAAAGGGTTGTATTACCGCCGTGATGGGTCCCAGTGGCGCTGGCAAGTCCACCTTCTTAGATGGTCTCGCCGGCAGAATTGCCAATGGCAGCCTCAAGGGAAGGGTCTGCTTGGATGGCACTGATACTAACCCTACTATGATCAAAAGAACCTCTGCCTATATCATGCAAGACGATAGGCTCTTCCCTATGCTCACTGTCTACGAAACTTTCATGTTCGCCGCTGATTTTCGGCTCGGTCCTCTTCCTTCTATTGAAAAGAAGGAGCGAGTAGAGAACCTCATTGAGCAGCTTGGCCTATCATCAACTCGGAACACATACATAGGAGATGAAGGCAAAAGAGGAGTATCCGGGGGAGAGAGGCGGCGAGTGTCGATCGGCGTCGACATCATCCACGGACCTCCGCTTCTATTTCTGGACGAGCCGACTTCTGGTCTGGACTCAACCAGCGCACACAGCGTGATCGAGAAGGTTCACGACATCGCACGCAGCGGAAGCACCGTGATCCTCACAATCCACCAGCCTTCATCAAGAATTCAGCTCCTTCTCGACCACCTGATCATCCTCGCCAGAGGGCAACTCATGTTTCAGGGCTCTCCCAAAGACGTCTCTCGCCATCTGGGTCGCTTGGGACGTAAAGTTCCCAAGGGAGAGAATCCCATAGAGAACCTCATTGATGTGATTCAAGAATATGATCTGTGTGATGTTGGTGTCGGAGCTCTTGCTGAGTTTGCCCGCACCGGAGTGAAACCCCCTCCTTTGCCTGGCCAGGATTCCTCCCACTCCACCGTCGTACCGTCAACCCCAGGCCCGAACCATCGCCTCGAATATCGTTCCAACGTAAATGATTTCGATCACAGTCTGAGAAGTGTGAGAAGTCCTCGTACACCCCATAGTGGATTGCTTCAGATGTTAACACCTTCTCGCTTTAACAATGTACATAAACTGCAGAATACTCCTATAAGTAATGCTTCGGCTGGGTACTACACGTACTCGAGCGAGATCCTGCCGGCAACACCGACGCCTCATAGCAGCGACTACACTGTGAATGAGAATGACTACCTGACGCCGCCGGAAAGGGTTATGCCAAAGCATGTGGGTCCAGAATTCGCAAACTCGTTCTTGACGGAGACGTGGATTCTGATGCGGCGGAACTTCACAAACATCCGGAGAACCCCTGAGCTTTTCCTCTCAAGACTAATGGTGCTCACGGTGATGGGCTTCATGATGGCTACCATGTTCAAGAACCCACCACCAAATGTTCAAGGAATCACCAACCGCCTCAGCTTCTTCATCTTCACCGTCTGTCTCTTCTTCTTCTCCTCCAACGACGCCGTTCCGGCCTTCATCCAAGAACGATTCATCTTCATCAGAGAAACCTCCCACAACGCCTACCGAGCCTCGTCGTACACCATCGCAGGAATAATCACTCACACCCCTTTTCTTTTGCTGCAAGCTTTCGCCTACGCCATAATTGTCTGGTTTGCTTTGAAGCTTCAAGGTCCATTTCTCTTCTTCCTTCTGGTTCTCTTTGTCTCTCTTCTCTCCACCAACTCGTTCGTGGTTTTCGTGAGCTCGGTGGTTCCGAACTATATTCTCGGTTACGCGGCCGTGATCGCCTTTACCGCTTTGTTCTTCTTGTTCTGTGGTTACTTCTTGAGCAGCGACGATATTCCGATTTATTGGCGATGGATGAACAAAGTTTCGACCATGACGTATCCTTATGAGGCGCTTTTAATCAACCAGTATCGAAACTCAGATGTGTTTGGGAAAAATCCGGACCAGAACCAGACAGATATTACAGGTATTGATATCTTGAAAGGTCTTCATATAAGTACTAGTTCGTCTACAAAGTGGAAAAATGTGGGTATAATGTTGTTATGGGCGGTCCTGTATAGGATTTTGTTTTACTTGGTCCTTCGTTTTGCCTCCAAAAACCAGAGGTCGTAG 2169 0.4942 MASHQPNNIPARRDHHQQHQHQAETVINVKRSVNFTGGLEFSGLTYTVTKEKKVNQSKVKEKVDLLHNITGYAPKGCITAVMGPSGAGKSTFLDGLAGRIANGSLKGRVCLDGTDTNPTMIKRTSAYIMQDDRLFPMLTVYETFMFAADFRLGPLPSIEKKERVENLIEQLGLSSTRNTYIGDEGKRGVSGGERRRVSIGVDIIHGPPLLFLDEPTSGLDSTSAHSVIEKVHDIARSGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSPKDVSRHLGRLGRKVPKGENPIENLIDVIQEYDLCDVGVGALAEFARTGVKPPPLPGQDSSHSTVVPSTPGPNHRLEYRSNVNDFDHSLRSVRSPRTPHSGLLQMLTPSRFNNVHKLQNTPISNASAGYYTYSSEILPATPTPHSSDYTVNENDYLTPPERVMPKHVGPEFANSFLTETWILMRRNFTNIRRTPELFLSRLMVLTVMGFMMATMFKNPPPNVQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIAGIITHTPFLLLQAFAYAIIVWFALKLQGPFLFFLLVLFVSLLSTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLSSDDIPIYWRWMNKVSTMTYPYEALLINQYRNSDVFGKNPDQNQTDITGIDILKGLHISTSSSTKWKNVGIMLLWAVLYRILFYLVLRFASKNQRS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1225 722 Gene3D - 40 285 IPR027417 -
Acco11g1225 722 MobiDBLite consensus disorder prediction 1 22 - -
Acco11g1225 722 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 289 IPR003439 GO:0005524
Acco11g1225 722 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 22 710 - -
Acco11g1225 722 FunFam ABC transporter G family member 6 49 287 - -
Acco11g1225 722 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 283 IPR027417 -
Acco11g1225 722 ProSitePatterns ABC transporters family signature. 189 203 IPR017871 GO:0005524|GO:0016887
Acco11g1225 722 MobiDBLite consensus disorder prediction 324 347 - -
Acco11g1225 722 SMART AAA_5 75 273 IPR003593 GO:0016887
Acco11g1225 722 Pfam ABC-2 type transporter 450 656 IPR013525 GO:0016020|GO:0140359
Acco11g1225 722 Pfam ABC transporter 66 217 IPR003439 GO:0005524
Acco11g1225 722 CDD ABCG_EPDR 39 271 - -
Acco11g1225 722 MobiDBLite consensus disorder prediction 329 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1225 Acco-ChrAcco11 25989375 25992157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1225 63 303 Calmodulin-binding Proteins AT2G36910 27.823 9.36e-11 63.5