Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1214 ATGTCCAGCATGAAATCAGTGCTAGAGAGGTATAACACAAGCAAGGAGGAACACCAGCAACTTCTGAATCCAAGTTCGGAAGCCAAGTTTTGGCAAAGGGAGGCAGAAGTATTAAGGCATCAACTACAGACCCTACAAGGAAACCATCGGCAAATGATGGGAGAACAGCTTTATGGTTTAAGTGTGAAAAACCTACAAGATCTTGAGAACCAGCTGGAAATGAGTGTCAGATGTATTCGCATGAAAAAGGAGCAAATTCTAACAGAAGAAATCCGAGAGCTGAATCAAAAGGGAAACAGTATACATCAGGAAAACCTGGAACTCTATAAGAAGGTTTATGGCACATTGGAAATGGCAGCTACAAGCAGAGATGCATTCAATCCATACGGGTTTCATACAGGTGAGGACCCACAAGAACTGATCCAACTGCAGCTAAGCCAGCCAGAGCAAGACACTTATGAGACATCAGGCAGTGCCTCAAAATAA 486 0.4321 MSSMKSVLERYNTSKEEHQQLLNPSSEAKFWQREAEVLRHQLQTLQGNHRQMMGEQLYGLSVKNLQDLENQLEMSVRCIRMKKEQILTEEIRELNQKGNSIHQENLELYKKVYGTLEMAATSRDAFNPYGFHTGEDPQELIQLQLSQPEQDTYETSGSASK 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1214 161 Pfam K-box region 25 112 IPR002487 GO:0003700|GO:0005634|GO:0006355
Acco11g1214 161 MobiDBLite consensus disorder prediction 1 23 - -
Acco11g1214 161 ProSiteProfiles K-box domain profile. 28 119 IPR002487 GO:0003700|GO:0005634|GO:0006355
Acco11g1214 161 Coils Coil 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1214 Acco-ChrAcco11 25745302 25748141 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1214 2 159 MADS-box Gene Family AT2G22630 51.705 6.20e-51 160