Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1190 ATGGCCACAATACAACATGAGATTGAGCATCCAAGGAAGGCCTTTGGATGGGCAGCTAGGGACGCATCTGGGGTTCTCTCCCCTTTCAATTTCTCTCGAAGGGAAACCGGAGAGAAAGATGTGAGATTCAAAGTTATGTATTGTGGAATATGCCACTCCGACGTCCACATGCTTAAGAACGAATGGGGCAATTCCGTCTATCCCCTTGTACCTGGGCATGAGATTGCCGGCATAGTGACAGAAGTGGGAAGCAAAGTACAAAAATTCAAAGTTGGAGACAAGGTTGGGGTGGGATGCTTGGTTGGGTCCTGTCGATCCTGTGAAAGCTGTTCCGACGACCTAGAGAATCTATGCTCAAAGCATATTCTCACATATGGTGTCAAGTACGTGGATGACACTATTACATATGGAGGTTACTCTGACTTTATGGTCACCGACGAGCACTTTGTCGTTCGCATTCCAGATGCTTTGCCTCTTGATGCTGCAGCTCCTCTGCTCTGTGCGGGAATCACAGTGTATAGCCCTTTGAGATACTATGGTCTGGACAAGCCCGACCTTCATGTGGGCGTGGTTGGTCTCGGTGGGCTTGGCCATATGGCTGTCAAGTTTGCCAAAGCCTTTGGTGCTAAAGTCACTGTCATAAGTACATCTCCAAACAAGAAGAAGGAAGCCATTGAACATCTTGGAGCTGATTCCTTCATTGTCAGTTGTGAGCAAGACCAGATGCAGGCTGCAATGGGGACTTTGGATGGGATCATTGACACAGTTTCTGCACAACATCCTCTGGTGCCTTTGATTGGTCTGTTGAAGTCTAATGGAAAACTTGTATTGGTGGGTGCACCTGAAAAGCCTCTAGAACTTCCTGTGTTCCCTTTACTTGCAGGGAGAAAGATGGTCGGTGGGAGTATCATCGGAGGAATGAAGGAGACACAGGAAATGGTTGATCTTGCTGCTAAGCACAGTGTGAAACCTGACATTGAAGTTATTCCAGTGGATTATGTGAATACAGCAGTAAAGCGTCTCCTTAAATCTGATGTCAAATATCGTTTTGTGATTGACATTGGCAACACATTGAAGCCAACAACCAGCTCTTAG 1095 0.4667 MATIQHEIEHPRKAFGWAARDASGVLSPFNFSRRETGEKDVRFKVMYCGICHSDVHMLKNEWGNSVYPLVPGHEIAGIVTEVGSKVQKFKVGDKVGVGCLVGSCRSCESCSDDLENLCSKHILTYGVKYVDDTITYGGYSDFMVTDEHFVVRIPDALPLDAAAPLLCAGITVYSPLRYYGLDKPDLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADSFIVSCEQDQMQAAMGTLDGIIDTVSAQHPLVPLIGLLKSNGKLVLVGAPEKPLELPVFPLLAGRKMVGGSIIGGMKETQEMVDLAAKHSVKPDIEVIPVDYVNTAVKRLLKSDVKYRFVIDIGNTLKPTTSS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1190 364 SMART PKS_ER_names_mod 24 352 IPR020843 GO:0016491
Acco11g1190 364 PANTHER ALDEHYDE REDUCTASE 6 357 IPR047109 GO:0016616
Acco11g1190 364 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Acco11g1190 364 SUPERFAMILY GroES-like 10 200 IPR011032 -
Acco11g1190 364 Gene3D - 17 354 - -
Acco11g1190 364 CDD CAD1 15 353 IPR047109 GO:0016616
Acco11g1190 364 FunFam Cinnamyl alcohol dehydrogenase 168 324 - -
Acco11g1190 364 Pfam Alcohol dehydrogenase GroES-like domain 39 152 IPR013154 -
Acco11g1190 364 FunFam Uncharacterized protein 17 167 - -
Acco11g1190 364 Gene3D - 168 324 - -
Acco11g1190 364 FunFam Putative cinnamyl alcohol dehydrogenase 6 325 354 - -
Acco11g1190 364 Pfam Zinc-binding dehydrogenase 195 318 IPR013149 -
Acco11g1190 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 323 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1190 Acco-ChrAcco11 25335218 25336757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1190 12 361 Monolignol Biosynthesis Gene Families AT4G37990 72.000 1.23e-176 493