Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1185 ATGAAAATTCGATCTAAACGACTTTGCCATTCGCCCCGGAAGAGAGAGAAGGACATCAGAAATGACGTGTCCTTAAAAACAGCGCGTGTCAAAGCGTCTCAGTTCCCTCTCAAGGCTGCTTTTGTGCTGGATGTAAGGGGATTGGTGATCAAGAGGCCTTTCACTCTTCCGGTACTGTCTCATATAGGCATATTCCGTAAATTTGTTTCCAGAACTGCAGTCAACTCCAAGGCATTTGTACAACCTCAAAGCAAAGATCCGACAGGGAAATCTATCAGATACATAGATTCACAAAGTTGTGGAATTCTTGATGTTACAAATCCTGCAACACAAGAAGTTGTGTCTCAAGTTCCTTTAACTACTTATGAAGAGTTCAAAACTTCAGTTAAAGCAGCCAAGCAAGCTTTTCCTTCATGGAAAAACACTCCAATCACCACTCGCCTGCAGATTATGTTGAAGTTCCGAGAGCTTATCTGCAGGGACATCGATAAGCTTGCCATGAATATCACCATAGAGGAGGGTAAGACTTTAAAAGGTGCTAAAAGAGACGTGCTCCGTGGTTTGGAGGTGGTGGAACATGCTTGTGGGATGGCAAATCTGCAGTTGGGGGAATTTGCCCCTAATGCTCGTGATGGAATTGATATATACTGCATAAGAGAACCCCTTGGAGTTTGTGCTGGAATATGCCCAGTCAACTTTCCAGCAATGATACCCCTGTGGATGTTACCTATAGCAGTTGCATGTGGAAACACTTTTATTCTCAAGCCATGTGAGAAGAATCCAGGGGCTTCAATGATACTTGCAGCACTAGCAATGGAAGCGGGTTTTCCAGACGGTGTATTAAACATTGTTCATGGTACCCATGAGATTGTTAATCACATATGTGATGATAAGGATATAAAAGCTATATCATTTGTGGGGCCAACTGCGGCTGGAATGCACATATATGCGGGGCCTGCTGCTAGAGGGAAACGTGTCCAGTCCAATACAGGCAGTAAAAATCATGCAGTTGTCATGCCAGATGCTAGCGTGGATGCTTCTCTAGATGCTCTTATTGCTGCTTCTTTTGGTGAGGCAGCAGAGAGATGGATGACTCTAAGCACAGCTATTTTTGTTGGAGGATCATTGCCATGGGAAGAAGAACTTGTGCAGCGTGCCAAAGTACTTAAAGTGAATGCAGGAACAGAGCCTAGTGCTGATCTTGGTCCAGTTATTAGCAAGGAGGCAAAGGATCAGATATGTAGATTAGTTCAGAGCGGTGCTGAAAATGGTGCAAGGCTACTGCTTGATGGAAGACATATTGTGGTACCAGGATATGAGAATGGGAACTTTGTTGCCCCTACAATTTTATGTGATGTTACAATCAACATGGAGTGCTACAAGGAAGAAAGTTTTGGACCAGTTCTTCTCTGCATGCAGGCTAATAGCCTTGATGAGGCAATATCAATAATCAACAAAAACAAGTATGTAAACGGAGCTACCATATTTACCACATCTGGTATAGCTGCTAGGAAGTTCCAGAACGAGGTTGAGGCTGGTTTGGTTGGAATCAATGTTACTGCTCCTGTTCCTTTGCCATTTTCTTCCTTCAGCGGGTCAAAGGCATCTTTTGCTGGTGATCTAAACTTTTGTGGTAAGGAAGGAGTTCAGTTTTACACTCAGATCAAAACAGTGGCACAACAATGGAAGGAGTTCCCAAGTCTTGGTGTTTTGCCTTCTGCAAGTCTAGCTGACATGGGCAGGACCGATCGGCATGTCTCATCATCAGTGCCTCCACCAGACAGACACTCACCTATAAAAATCGTGTCACAAATCATGCCTGTAGAATCTGAGTGTAATTCACCAGCACAAGGGGTGCAAATTGCGATTCCAGACCTTACTACCGAGATCACGACCGTGTCATCTGCTTCTCCATCAACTGATAAGGGTCTTGGAAAACTGGCCATGTCCCTGGTTCTGCCTTTGTCATCTGTGAGAGACATGGAAGATCAGGACATGTCATTGGTATTATCACCTGCATCTCACAGAGACATGACGAGCCAGCAAGTGTCAGTAGCCACACCCCAGACATCAGAGAGGCTGTACTTTCCTAAATCACCACAATGGAATGAAGGTTCCTCTGCAATATCTCAAAAGAGGGAAAATATCTCATCCACTTCTGATAGGAGTCACGTGCCTTCATCTCTAAGAAATAATAGTACAGCGCCAACATCTCAGAGAACTGATGCCAACGCCACCACAGCTTTGGAATCAGAGAGGCCGTACATGCCCTTATCCAATAAAGTTGATAGCATCGGTCCATCCCACCGGATAGATGCTTCTATGCCTTCTACTTCTGGAAGTGTTGTGTATGTCCTAGCACCATCTCATTTAAACGATAGCCTTGGCCGAACATTTGAAAGACCTGAAACCTTGTTTACAACTTCTGAGAGGATATATATGCCTGCTTTATCTCACAGTACTGATATTGGCTTAGGTCCTACTTCGGAGAGGATGCACATCACTGCAACATCTCATAGAACTGAAAGAATTAGCGCTCCATCCCAGCTAGGCAATGCTTTGCCACCTATAGTACAAAATATGACGGCAAGTTCAGAGAGGCGGCAAGAGAGTGGCATACTGGCATTGTCTAAAGATGACTGCCTCCTAAAGGCCTTGGTGCGGGTCGATTGCATAGCGCTGGGAAGAACGAAAATGCTATGCAGTTATCCTCAGTGGACTTCCATTTTCTGCCCACAACCTCTGGCATTCAATAAATCATCTTTTCAATCTAGGCTTTCGGTTGCTCCCCCACAGACGGGCAAAGAAGGAAGTTCCGATTACAACGATGTCGAGTATGGTGACAACTTTGGTTCTGAGGATGACATTCTTCGCGCAATTTCTGATGCAAAATCGAAATTTATTACCAGTGCCAAAAACCCATTTGTGAAACACTGCATCAAGCTCCGCAACGACTCTTCTTATCGCCGTTATCATGGTTCAGTTCTTGTTGTGGGTTCTACACCTATCAGGGAAATATACAGGTTTCAAGAGTCATTGCAAGATAATAATATTAAGATGGATTGTTTGATTCTGCCTGATAAAACTGAGGTTCCTGAAGGGCTAGATAAATCCCCTTCTTCGATTATGCGTGTGAGTTCTACAGTGATGAAAAAACTTGCACGGCTGCAGTCAACTGATAGTCTTGATGCAATTGCCCTGATGAAGATTCCTACCAGTTTCTTCAGTTTAGATGACAATCAAGACACAGCAGATTGTTGGAGGTGGTTTCCATCTCCTCATCGGATTTTAGTCCTTGAAAGGATTCAGGATCCTGGTAATCTTGGTACATTACTCAGATCAGCTGTTGCTTTTGGCTGGAATGGAGTTTTTCTTCTTCCTGGTTGCTGTGATCCATTCAATGATAAAGCTCTTCGAGCTAGCCGAGGTGCCTCCTTTCAGCTACCCATAGTTTCTGGGGATTGGGTTCATCTGGAGTTTCTTACAGGGCAATTCCAAATGAAGTTGCTTGGTGGCCATCCAGAGGATGAAGGGGTAGCCAAACCGGTTTATCAGATTTCTCCTAGCTTCTGTGATTCTGTATCAGATAAGCCTCTGTGCTTGGTTTTGGGTAGTGAAGGAAGTGGGCTTTCAGAGAAATCTATGCAAGCATGTGAACTTGTCAGCATTCCAATGGCTGGAGAATTTGAGTCTCTCAATGTTTCAGTTGCTGGTGGGATTTTCCTGTATATGCTCCAGCCAAAGTGTAGCTGA 3753 0.4428 MKIRSKRLCHSPRKREKDIRNDVSLKTARVKASQFPLKAAFVLDVRGLVIKRPFTLPVLSHIGIFRKFVSRTAVNSKAFVQPQSKDPTGKSIRYIDSQSCGILDVTNPATQEVVSQVPLTTYEEFKTSVKAAKQAFPSWKNTPITTRLQIMLKFRELICRDIDKLAMNITIEEGKTLKGAKRDVLRGLEVVEHACGMANLQLGEFAPNARDGIDIYCIREPLGVCAGICPVNFPAMIPLWMLPIAVACGNTFILKPCEKNPGASMILAALAMEAGFPDGVLNIVHGTHEIVNHICDDKDIKAISFVGPTAAGMHIYAGPAARGKRVQSNTGSKNHAVVMPDASVDASLDALIAASFGEAAERWMTLSTAIFVGGSLPWEEELVQRAKVLKVNAGTEPSADLGPVISKEAKDQICRLVQSGAENGARLLLDGRHIVVPGYENGNFVAPTILCDVTINMECYKEESFGPVLLCMQANSLDEAISIINKNKYVNGATIFTTSGIAARKFQNEVEAGLVGINVTAPVPLPFSSFSGSKASFAGDLNFCGKEGVQFYTQIKTVAQQWKEFPSLGVLPSASLADMGRTDRHVSSSVPPPDRHSPIKIVSQIMPVESECNSPAQGVQIAIPDLTTEITTVSSASPSTDKGLGKLAMSLVLPLSSVRDMEDQDMSLVLSPASHRDMTSQQVSVATPQTSERLYFPKSPQWNEGSSAISQKRENISSTSDRSHVPSSLRNNSTAPTSQRTDANATTALESERPYMPLSNKVDSIGPSHRIDASMPSTSGSVVYVLAPSHLNDSLGRTFERPETLFTTSERIYMPALSHSTDIGLGPTSERMHITATSHRTERISAPSQLGNALPPIVQNMTASSERRQESGILALSKDDCLLKALVRVDCIALGRTKMLCSYPQWTSIFCPQPLAFNKSSFQSRLSVAPPQTGKEGSSDYNDVEYGDNFGSEDDILRAISDAKSKFITSAKNPFVKHCIKLRNDSSYRRYHGSVLVVGSTPIREIYRFQESLQDNNIKMDCLILPDKTEVPEGLDKSPSSIMRVSSTVMKKLARLQSTDSLDAIALMKIPTSFFSLDDNQDTADCWRWFPSPHRILVLERIQDPGNLGTLLRSAVAFGWNGVFLLPGCCDPFNDKALRASRGASFQLPIVSGDWVHLEFLTGQFQMKLLGGHPEDEGVAKPVYQISPSFCDSVSDKPLCLVLGSEGSGLSEKSMQACELVSIPMAGEFESLNVSVAGGIFLYMLQPKCS 1250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1185 1250 FunFam Putative tRNA/rRNA methyltransferase YsgA 1084 1250 - -
Acco11g1185 1250 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 331 531 - -
Acco11g1185 1250 Pfam SpoU rRNA Methylase family 1096 1243 IPR001537 GO:0003723|GO:0006396|GO:0008173
Acco11g1185 1250 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 331 531 IPR016163 GO:0016620
Acco11g1185 1250 MobiDBLite consensus disorder prediction 673 748 - -
Acco11g1185 1250 SUPERFAMILY alpha/beta knot 1091 1245 IPR029028 -
Acco11g1185 1250 CDD ALDH_F6_MMSDH 93 562 IPR010061 GO:0004491
Acco11g1185 1250 Gene3D - 967 1071 IPR029064 -
Acco11g1185 1250 SUPERFAMILY L30e-like 966 1065 IPR029064 -
Acco11g1185 1250 Gene3D - 1088 1249 IPR029026 -
Acco11g1185 1250 MobiDBLite consensus disorder prediction 671 759 - -
Acco11g1185 1250 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 94 691 IPR010061 GO:0004491
Acco11g1185 1250 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 91 337 - -
Acco11g1185 1250 CDD SpoU-like_rRNA-MTase 1095 1245 - -
Acco11g1185 1250 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 105 539 IPR016162 GO:0016491
Acco11g1185 1250 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 94 562 IPR010061 GO:0004491
Acco11g1185 1250 SUPERFAMILY ALDH-like 97 564 IPR016161 GO:0016491
Acco11g1185 1250 Pfam Aldehyde dehydrogenase family 95 558 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1185 Acco-ChrAcco11 25235572 25250515 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1185 94 546 Aldehyde Dehydrogenase Gene Family AT2G14170 71.744 0.0 685