Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1173 ATGAATTTATTAAGCAACGGCAAGTCCATGGAGATGTTGGGTATACCAGATGTAAGGTTTATGTTGGCGACTTGGCATTTAGCAGGAACAATTGAAGTGATTCACACTGCTAGTTTAGTATGTGATGATGCATTGGATGAGAGAAACCTTCGAAGAGGTATTCTTACAACACACGCAGTCAACATCGGCCATAAGCCAAATTCCCGAAGTCGTTGGTGCTGGTATATGTACTCAACGTCGGTCCTGGAGACCTTCACGTATGCTCACGCTAAATCAACTGCGTTGGCCACGTCGGAGATCAGTGTTACATCATCGGTGCCGAGATGGGTGTTCGCGCTATCAGCACATATAAGATGTATGGATCAGCTGCTTGAAAGTAGTGTTGATATTGATCTTAAGAAGAAGGAAGATCTCACTGCACTTCATATAACTACTACAGAAAAGAAAGAAGCTGTAATAAGCCATCTTTTACATAAAGGTAGAAGTCCTCATGTCAAGGATGATGATGGTGCCGCCCCGCTTCATTGCGCAGTTCAAATTGATGCCAAGCAAACGGAGTTGATGAATAAGATGAGGGAGCTGTATGAGGAGGCAGCAATCTTAAAGTACCAGAAACCTGACAAGGATCTTAATGCCCTTGTCTCTGTCGTGCATGATGATTATGTGGTTAATATGATGAAAGAGTATGACAAATTAGGTTCAAGTGATGGATTTACTAGGCTTAGAATCTTTTTGTCCTCACAACCTGAGCAAGATATTTCTTTACATTTCATTGGTGGGGATGAGAGGGGTACTGAGAGAAGGTATGTTGATACATTGAATAATTTAAACGATGCTTCGGGTTTTATGAAGCAGCAACTAGGTGAGTTTCCTATGGTTGGTTCGGTTGAGGATATGCATGGAGCTTATCAGTTCTTTAATCCAATCAGCATGGATGTTGGCCTTCATAGCCAGAAAAGTAGTGAGTTGCATGGATTTGCTTGCCAAGATCCAAAGAAGCCAGACCATGATGAGCACAACCACAGAGCATATTGCAGTGGTGATCTCGCCTATTTGGGAGTATTCTGGAGTAAAACCATTGGCTTAGCAGGAGAGATTCCACTCCAGGGAGACTTCTCAGCTGAACATATGATGGGCAGAGACACAGAGTGCAAATTAGCATGGGTTTTCTTTGAAAACTATGTTTCTAATACGAGGGCATCATCGATGGACGACTTGCTGATTATCGATGGAGTTAAATACTTGGCACTGAGTCTAACCTTGATGATTGAGGGTTTGAGAAGGATGGAATTTATTCAATTGATATGGTTTGGCATTAGCCTGGTATTTATTTTCATTCCTAAAATGCTTCAACCAGCATCCTTTTATGAGATGGTTCAACCGTTGCCAAGCAAAAGTTCGCTGCACAGTGGGAAATTCTTCGAGCTTATAAGCAGCATAGGAGTGATTAGTAAACTCCAAGAAGTGGTCAAAAGCCCCTATCTTGCGACAATGGTTGCTCATCAAAGGAAATTAGCTATCATGACAACATGGATGAATCTTTGGCAGAGATTGAAGGAGCTCACAGTTCTTTATTGA 1578 0.4195 MNLLSNGKSMEMLGIPDVRFMLATWHLAGTIEVIHTASLVCDDALDERNLRRGILTTHAVNIGHKPNSRSRWCWYMYSTSVLETFTYAHAKSTALATSEISVTSSVPRWVFALSAHIRCMDQLLESSVDIDLKKKEDLTALHITTTEKKEAVISHLLHKGRSPHVKDDDGAAPLHCAVQIDAKQTELMNKMRELYEEAAILKYQKPDKDLNALVSVVHDDYVVNMMKEYDKLGSSDGFTRLRIFLSSQPEQDISLHFIGGDERGTERRYVDTLNNLNDASGFMKQQLGEFPMVGSVEDMHGAYQFFNPISMDVGLHSQKSSELHGFACQDPKKPDHDEHNHRAYCSGDLAYLGVFWSKTIGLAGEIPLQGDFSAEHMMGRDTECKLAWVFFENYVSNTRASSMDDLLIIDGVKYLALSLTLMIEGLRRMEFIQLIWFGISLVFIFIPKMLQPASFYEMVQPLPSKSSLHSGKFFELISSIGVISKLQEVVKSPYLATMVAHQRKLAIMTTWMNLWQRLKELTVLY 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1173 525 SUPERFAMILY Terpenoid synthases 23 65 IPR008949 -
Acco11g1173 525 Pfam Polyprenyl synthetase 25 65 IPR000092 GO:0008299
Acco11g1173 525 Pfam PB1 domain 184 245 IPR000270 GO:0005515
Acco11g1173 525 Gene3D - 94 203 IPR036770 -
Acco11g1173 525 PANTHER OS05G0427100 PROTEIN-RELATED 178 301 - -
Acco11g1173 525 SMART PB1_new 157 246 IPR000270 GO:0005515
Acco11g1173 525 ProSitePatterns Polyprenyl synthases signature 1. 39 53 IPR033749 -
Acco11g1173 525 Gene3D Farnesyl Diphosphate Synthase 11 90 IPR008949 -
Acco11g1173 525 SUPERFAMILY CAD & PB1 domains 180 252 - -
Acco11g1173 525 SUPERFAMILY Ankyrin repeat 102 182 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1173 Acco-ChrAcco11 24957721 24961486 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1173 177 323 MAP Kinase Kinase Kinase AT5G57610 55.705 2.23e-41 157