Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1171 ATGGTAACATTAGAGAAGCACGGAAGAGAGTTTTCCGGCGACGATGAGGCGTCGCCGAGAGGTATACTGGAAATTCCCGTTTCAGGCACGGAATCTGACAACAGCGGAAGTAGTAGCAGTAGCAGAAACAGCAGCAGCTTCTTCAGCTTAAGCTCGCCGGAGAAGTCCTCGTCGTCGGAGACAGAGAGAGTGAGCGTGAGGGAATGTCAGGGACAGCCATGGAAGGCGATGATAGATTCGTGGAGGAAGAAATCAGTGCAGAGAATATCGGCGATTTCATTACTTGCATCGAGCTACGAGATGTCGAAGAAAAGCTTGAGGAAGAGGAGGATTGAACGGATTCGTAGTGCAGAAGATCGAATTAATCTGGGAATTATACCTAAAAAGCTTTCATGGAGGAACTTCGATTACGCAGAGCTCCAAGCTGCAACAGATAATTTCAGTCCTGAGAACTTGATTGGACAAGGAGGGCATGCTGAAGTCTACAAAGGACACTTACCGGACGGTCAACTTGTGGCAGTAAAGAGGCTAATGAAGAAAGAGAAGGAAAATGAGGACAAAGCGGGTGATTACTTATCAGAGTTAGGCATTATTGCCCACATAAACCACCCAAATGCTGTGCGTTTGATTGGGTTTGGGGTCAACAATGGTCTCTACTTTGTCTTGCAATTAGCCCCACATGGCAGCCTTTCTTCTCTGCTCTTTGGTTCTGAATGCTTGGAGTGGAAGATAAGGTTCAAGGTAGCTGTTGGTGTGGCACAGGGCTTGCGATACCTGCATCATGATTGCCAGAGAAGAATCATTCACAGAGACATCAAGGCCTCCAACATAATACTAAATGAAAATTACGAAGCTGAGATTTCGGATTTTGGACTAGCCAAATGGCTCCCAGAGAAGTGGCCTCACCATGTTGTCTTCCCAATAGAAGGCACATTCGGGTATTTGGCTCCAGAGTATTTTATGCATGGAATTGTGGATGAGAAGACCGATGTATTCGCCTTTGGGGTTTTGCTGCTGGAACTCATCACTGGTCGTCGTGCAATTGATTCATGCAGCAAGCAAAGTCTTGTCCTCTGGGCAAAATCACGACTAGAAAAACACAACGTGAAGGAATTAGTAGACCCACGATTAGAAGAAGCTTATGATTCCACTGAATTGAAGAGAACCATGCTTACTGCTTCCATGTGTCTCCACCACTCATCCCCCCAACGTCCGTACATGAAACAGGTCGTGCAGCTGCTGAAGGGTGAAGAGGGACTTGTTGATGTTCAGCAGAAATCAGTATCAACAAGATCCATCTTGTTAGATGCCTGTGACCTTGAAGAATATACCTGCTCTACTTACTTGAACGATCTCAATCGTCACAGGCAACTAGTCATGGAGTGA 1386 0.4618 MVTLEKHGREFSGDDEASPRGILEIPVSGTESDNSGSSSSSRNSSSFFSLSSPEKSSSSETERVSVRECQGQPWKAMIDSWRKKSVQRISAISLLASSYEMSKKSLRKRRIERIRSAEDRINLGIIPKKLSWRNFDYAELQAATDNFSPENLIGQGGHAEVYKGHLPDGQLVAVKRLMKKEKENEDKAGDYLSELGIIAHINHPNAVRLIGFGVNNGLYFVLQLAPHGSLSSLLFGSECLEWKIRFKVAVGVAQGLRYLHHDCQRRIIHRDIKASNIILNENYEAEISDFGLAKWLPEKWPHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAIDSCSKQSLVLWAKSRLEKHNVKELVDPRLEEAYDSTELKRTMLTASMCLHHSSPQRPYMKQVVQLLKGEEGLVDVQQKSVSTRSILLDACDLEEYTCSTYLNDLNRHRQLVME 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1171 461 MobiDBLite consensus disorder prediction 28 66 - -
Acco11g1171 461 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 226 428 - -
Acco11g1171 461 PANTHER OS08G0249100 PROTEIN 12 429 IPR046958 -
Acco11g1171 461 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 124 224 - -
Acco11g1171 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Acco11g1171 461 SUPERFAMILY Protein kinase-like (PK-like) 129 414 IPR011009 -
Acco11g1171 461 Pfam Protein kinase domain 150 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1171 461 Gene3D Transferase(Phosphotransferase) domain 1 226 433 - -
Acco11g1171 461 Gene3D Phosphorylase Kinase; domain 1 125 222 - -
Acco11g1171 461 ProSitePatterns Protein kinases ATP-binding region signature. 153 175 IPR017441 GO:0005524
Acco11g1171 461 MobiDBLite consensus disorder prediction 1 67 - -
Acco11g1171 461 MobiDBLite consensus disorder prediction 1 17 - -
Acco11g1171 461 ProSiteProfiles Protein kinase domain profile. 147 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1171 461 SMART serkin_6 147 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1171 Acco-ChrAcco11 24925382 24929821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1171 134 460 Trihelix Transcription Factor Family AT1G70460 39.763 5.90e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Acco11g1171 Pkinase 6e-41 CL0016